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HUMAN-VUL5EQG4X

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

StatusArchived · seen 2019-03-01 → 2022-01-17 SpeciesHomo sapiens LocusTRA TypeV FunctionalNone Length1355 nt RecordSuperseded

a Homo sapiens TRA V allele sequence, 1355 nt, not recorded, archived. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

A newer source record exists for this allele designation. TRAV8-5*01 is still published by IMGT as HUMAN-V5USFTBY4, 84 nt, a shorter cut contained in this sequence. This is the earlier record (1355 nt, current in IMGT releases 2019-03-01–2022-01-17). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.

Earlier records of this allele i

IMGT has published this allele name over more than one sequence extent. Earlier sequence extents are deferred from default search results but remain resolvable, so a paper that cited one still leads here.

RecordNameLengthRelation to this recordIMGT releases
HUMAN-VEGHXP25R TRAV8-5*01 357 nt contained in this record 2013-01-20–2018-09-27
SpeciesHomo sapiens (NCBITAXON:9606)
Locus / typeTRA / V
Functional iNone
Length1355 nt
Protein UID iHUMAN-VP-WQPZEC (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

1355 nt
GCCCAGTCAGTGACCCAGCCTGACATCCGCATCACTGTCTCTGAAGGAGCCTCACTGGAGTTGAGATGTAACTATTCCTATGGGGCGATGTTGTGGGAAGTCAGGGACCCCAAACGGAGGGACCGGCTGAAGCCATGGCAGAAGAATGTGGATTGTGAAGATTTCATGGACATTTATTAGTTCCCCAAATTAATACTTTTATAATTTCTTATGCCTCTCTTTACTGCAATCTCTAAACATAAATTGTAAAGATTTCATGGACACTTATCACTTCCCCAATCAATACCCCTGTGATTTCCTATGCCTGTCTTTACTTTAATCTCTTAATCCTGTCAGCTGAGGAGGATGTATGTCACCTCAGGACCCTGTGATAATTGTGTTAACTGCACAAATTATAGAGCATGTGTGTTCAAACAATATGAAATCTGGGCACCTTGAAAAAAGAACAGGATAACAGCAATGTTCAGGGAATAAGAGAGATAACCTTAAACTCTGACTGCCAGTGAGCCAGGCGGAACAGAGCCATATTTCTCTTCTTTCAAAAGCAAATGGGAGAAATATGGCTGAATTCTTTTTCTCAGCAAGGAACATCCCTGGGGAAGAGAATACGTGCCTGGGGGTGGGTCTATAGACGGCCCCCTTGGGTGTGGCCATCTTCTATAGTCAAAACTGTAGGGGTGAAATAAATCCCAGTCTCCCATAGCACTCCCAGGCTTATTAGGAAGAGGAAATTCCCACCTAATAAATTTTGGTCAGACTGGCTGCTCTCAAAACCCTGTCTCCTGATAAGATGTTATCAATGACAATGGTGCCCGAAACTTCATTAGCAATTTTAATTTCGCCCCAGTCCTGTGGTCCTGTGATCTCGCCCTGCCTCCATTTGCCTTGTGATATTCTATTACCTTGTGAAGTACATGATCTCTGTGACCCACACCTATTCATACACTCCCTCCCCTTTTGAAAATCAGTAATAAAAACTTGCTGGTTTTGCGGCTTGTGGGGCATCACGGAACCTACCGACATGTGATTTCTCCCCCGGACTCCCAGCTTTAAAATTTCTCTCTTTTGTACTCTGTCCCTTTATTTCTCAAGCCAGCCAAAACTTAGGGAAAATAGAAAAGAACCTATGTGACTATCGGGGCAGGTTCCCCAATACGGCAACACCTTCTCTCTTCTGGCATGTCCAGTCCCCCGGCCAAGGCCTCCAGCTGCTCCTAAAGTACTTTTCAGGAGACACTCTGGTTCAAGGCATTGAAGGCTTTGAAGCTGAATTTAAGAGGAGTCAATCTTCCTTCAACCTGAGGAGACCCTCTGTGCATTGGAGTGATGCTGCTGAGTACTTCTGTGCTGCAGGT

Amino-acid sequence (V-REGION)

451 aa
AQSVTQPDIRITVSEGASLELRCNYSYGAMLWEVRDPKRRDRLKPWQKNVDCEDFMDIY*FPKLILL*FLMPLFTAISKHKL*RFHGHLSLPQSIPL*FPMPVFTLIS*SCQLRRMYVTSGPCDNCVNCTNYRACVFKQYEIWAP*KKNRITAMFRE*ER*P*TLTASEPGGTEPYFSSFKSKWEKYG*ILFLSKEHPWGREYVPGGGSIDGPLGCGHLL*SKL*G*NKSQSPIALPGLLGRGNSHLINFGQTGCSQNPVS**DVINDNGARNFISNFNFAPVLWSCDLALPPFAL*YSITL*ST*SL*PTPIHTLPPLLKISNKNLLVLRLVGHHGTYRHVISPPDSQL*NFSLLYSVPLFLKPAKT*GK*KRTYVTIGAGSPIRQHLLSSGMSSPPAKASSCS*STFQETLWFKALKALKLNLRGVNLPST*GDPLCIGVMLLSTSVLQ

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: first seen IMGT 2019-03-01; formerly TRAV8-5*01 (to 2019-03-01); re-cut from TRAV8-5*01 (357 nt); superseded by TRAV8-5*01 (84 nt); archived — removed from the current IMGT reference, kept reachable;

Allele names i

None.

Former IMGT names i

Former nameLast seen in IMGT release
TRAV8-5*012019-03-01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/HUMAN-VUL5EQG4X/similar?min_identity=0.95&kind=nt.