AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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LEMUR-VBKZ5ZQDD

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesLemur catta LocusIGL TypeV FunctionalNone Length294 nt

IGLV10-109*01: a Lemur catta IGL V allele sequence, 294 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesLemur catta (NCBITAXON:9447)
Locus / typeIGL / V
Functional iNone
Length294 nt
Protein UID iLEMUR-VP-ICSPES (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

294 nt
CAAGAAGTGCTGACTCAGCCTCTCTCAGTAACCACGTCCCCAGAACAGATGGTCACAGTCACCAGCGCTGGAATCAACAAGACGTTGTCAACCAGCACACAGCTTGGCAGAAGCAGCACCCGGGACATGTCCACAAATTTCTGATCCTCAGGGACAACTGACCTGCTGGGCCCTCAGGGAGACTCCCTGGCTCCAGGACAGACTGTGTGGCCTCTGCCACCATCTCTGGGCTCCAACCTGAGGATGGCGCCGGTCTTCTCTGTTCCGAAGAGGACGACAGCTTTGATGACTGCA

Amino-acid sequence (V-REGION)

98 aa
QEVLTQPLSVTTSPEQMVTVTSAGINKTLSTSTQLGRSSTRDMSTNF*SSGTTDLLGPQGDSLAPGQTVWPLPPSLGSNLRMAPVFSVPKRTTALMTA

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (LEMUR-VBKZ5ZQDD). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGLV10-109*01 IMGT IMGT

External records i

IMGT: IGLV10-109*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCCGGGTGGGCCCTGGGGAGATGAGACACACACC IMGT LEMUR-R5C2EN

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGGGGGCCTCAATGCCCCTCTGCTCCCCTCCCCACGCACTGGGCTCACTTATTTGTGGCC 51 + 11 nt IMGT LEMUR-LPNTII

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/LEMUR-VBKZ5ZQDD/similar?min_identity=0.95&kind=nt.