AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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LEMUR-VDL25MZRO

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesLemur catta LocusIGL TypeV FunctionalTrue Length298 nt

IGLV1-105*01: a Lemur catta IGL V allele sequence, 298 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesLemur catta (NCBITAXON:9447)
Locus / typeIGL / V
Functional iTrue
Length298 nt
Protein UID iLEMUR-VP-E42XG6 (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

298 nt
CAGTCTGCGCTGACTCAGCCGCCCTCGGTGTCTGGAGCCCCGGGGCAGACGGTCACCATCTCCTGCACGGGCAGCAGCAGCAACATCGGGGGTGGGTATGGTGTGCACTGGTACCAGCAGCTCCCAGGAACGGCCCCCAAACTCCTCATCTATGATAATAGCAAGAGACCCTCAGGGGTCCCTGCCCGATTCTCTGGCTCCAAGTCTGGCAGCTCGGGCTCCCTGACCATCACGGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCCAGTCCTATGACAGCAGCCTGGGTGCTC

Amino-acid sequence (V-REGION)

99 aa
QSALTQPPSVSGAPGQTVTISCTGSSSNIGGGYGVHWYQQLPGTAPKLLIYDNSKRPSGVPARFSGSKSGSSGSLTITGLQAEDEADYYCQSYDSSLGA

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (LEMUR-VDL25MZRO). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGLV1-105*01 IMGT IMGT

External records i

IMGT: IGLV1-105*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGAGCTGCAGACACAGGGGGAACTGAGACAAAAACC IMGT LEMUR-REXKCS

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGCCTGGAACCCTCTGCTCCTCACCCTCCTGGCTCACTGCACAGGGTCCTGGGCC 46 + 11 nt IMGT LEMUR-LIHXED

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/LEMUR-VDL25MZRO/similar?min_identity=0.95&kind=nt.