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LEMUR-VP4776OMT

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

StatusArchived · seen 2023-02-20 SpeciesLemur catta LocusIGH TypeV FunctionalNone Length294 nt RecordSuperseded

a Lemur catta IGH V allele sequence, 294 nt, not recorded, archived. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

A newer source record exists for this allele designation. IGHV5-66*01 is still published by IMGT as LEMUR-VDGYU3TL6, 292 nt, a shorter cut contained in this sequence. This is the earlier record (294 nt, current in IMGT releases 2023-02-20). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.

SpeciesLemur catta (NCBITAXON:9447)
Locus / typeIGH / V
Functional iNone
Length294 nt
Protein UID iLEMUR-VP-TL4CYY (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

294 nt
CAGCTGCAGCTGGTGCAGTCTGGGCAGAGGGGAAAAGCCTGGGGAGTCTCTGACGGTCTCCGGCAGGGCGTCTGGACACAGCGTTGTCAGACACCGCCTTAGCTCCGTGTGCCAGATGCCTGGGAGGGACCTGGCCTGGGTGGGCATGACCTATTCTGGAGGTTCAGATGCCCACTGCAGCCCGTCCTTCCAAGGCCACGTCACCATCACCACGGACAACCCCATCGGCACTGCCGAGCTGCCCTGCAGCAGCCTGAAGGCCTTGGGTGTGGCCGTGTCCTCCTGGGTGAGACA

Amino-acid sequence (V-REGION)

97 aa
SCSWCSLGRGEKPGESLTVSGRASGHSVVRHRLSSVCQMPGRDLAWVGMTYSGGSDAHCSPSFQGHVTITTDNPIGTAELPCSSLKALGVAVSSWVR

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: first seen IMGT 2023-02-20; formerly IGHV5-66*01 (to 2023-02-20); superseded by IGHV5-66*01 (292 nt); archived — removed from the current IMGT reference, kept reachable;

Allele names i

None.

Former IMGT names i

Former nameLast seen in IMGT release
IGHV5-66*012023-02-20

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/LEMUR-VP4776OMT/similar?min_identity=0.95&kind=nt.