AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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MOUSE-J2EV2Q7JO

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMus musculus LocusTRA TypeJ FunctionalTrue Length63 nt

TRAJ35*02: a Mus musculus TRA J allele sequence, 63 nt, functional. The nucleotide sequence is below, with every recorded name and its source.

SpeciesMus musculus (NCBITAXON:10090)
Locus / typeTRA / J
Functional iTrue
Length63 nt

Coding sequence (nt)

63 nt
GCAGACAGGGCTTTGCAAGTGCGCTGACATTTGGATCTGGCACAAAAGTCATTGTTCTACCAT

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (MOUSE-J2EV2Q7JO). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRAJ35*02 IMGT IMGT

External records i

IMGT: TRAJ35*02

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
j_rsAGTTTTTGTTGTAGAGTCAGCCACTGTG IMGT MOUSE-RKQNCK

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/MOUSE-J2EV2Q7JO/similar?min_identity=0.95&kind=nt.