AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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MOUSE-VD5FYBHVU

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

StatusArchived · seen 2015-03-19 SpeciesMus musculus LocusIGH TypeV FunctionalNone Length135 nt RecordSuperseded

a Mus musculus IGH V allele sequence, 135 nt, not recorded, archived. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

A newer source record exists for this allele designation. IGHV2-7*02 is still published by IMGT as MOUSE-VYKFNT5OI, 164 nt, whose bases differ from this one. This is the earlier record (135 nt, current in IMGT releases 2015-03-19). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.

SpeciesMus musculus (NCBITAXON:10090)
Locus / typeIGH / V
Functional iNone
Length135 nt
Protein UID iMOUSE-VP-DBKTJO (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

135 nt
CAAGTGCAGATGAAGGAGTCAGGACCTGACCTTGTGCAGCCATCACAGACTCTGTCTCTCACCTGCACTGTCTCTGGGTTCTCATTAAGTAGCTATGGTGTACATTGGTTTCGCAAGCCTCCGAGAAAGGGATTG

Amino-acid sequence (V-REGION)

45 aa
QVQMKESGPDLVQPSQTLSLTCTVSGFSLSSYGVHWFRKPPRKGL

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: first seen IMGT 2015-03-19; formerly IGHV2-7*02 (to 2015-03-19); superseded by IGHV2-7*02 (164 nt); archived — removed from the current IMGT reference, kept reachable;

Allele names i

None.

Former IMGT names i

Former nameLast seen in IMGT release
IGHV2-7*022015-03-19

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/MOUSE-VD5FYBHVU/similar?min_identity=0.95&kind=nt.