AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

MOUSE-VFJGWXE32

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMus musculus LocusTRA TypeV FunctionalNone Length280 nt

TRAV3-1*02: a Mus musculus TRA V allele sequence, 280 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Earlier records of this allele i

IMGT has published this allele name over more than one sequence extent. Earlier sequence extents are deferred from default search results but remain resolvable, so a paper that cited one still leads here.

RecordNameLengthRelation to this recordIMGT releases
MOUSE-VJJ4HN3Y7 TRAV3-1*02 278 nt contained in this record 2013-01-20–2015-03-19
SpeciesMus musculus (NCBITAXON:10090)
Locus / typeTRA / V
Functional iNone
Length280 nt
Protein UID iMOUSE-VP-IEHQXX (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

280 nt
GGCGAGCAGGTGGAGCAGCGCCCTCCTCACCTGAGTGTCCGGGAGGGAGACAGCTCCATTATCATCTGCACCTACACAGACAGTGCCACTGCTTACTTCTCCTGGTATAAGCAAGAGGCGGGGGCAGGTCTTCAGTTGCTTATGAGTGTCCTTTCAAATGTGGACAGAAAAGAAGAACAAGGACTCACTGTCTTACTGAACAAGAAAGACAAACGACTCTCTCTGAACCTCACAGCTGCCCATCCTGGGGACTCAGCCGTGTACTTCTGCGCAGTCAGTG

Amino-acid sequence (V-REGION)

93 aa
GEQVEQRPPHLSVREGDSSIIICTYTDSATAYFSWYKQEAGAGLQLLMSVLSNVDRKEEQGLTVLLNKKDKRLSLNLTAAHPGDSAVYFCAVS

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: re-cut from TRAV3-1*02 (278 nt);

Allele names i

Every name below denotes this exact sequence (MOUSE-VFJGWXE32). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRAV3-1*02 IMGT IMGT

External records i

IMGT: TRAV3-1*02

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/MOUSE-VFJGWXE32/similar?min_identity=0.95&kind=nt.