MOUSE-VHPXHPAB2
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
TRAV15-1/DV6-1*02: a Mus musculus TRA V allele sequence, 292 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
Earlier records of this allele i
IMGT has published this allele name over more than one sequence extent. Earlier sequence extents are deferred from default search results but remain resolvable, so a paper that cited one still leads here.
| Record | Name | Length | Relation to this record | IMGT releases |
|---|---|---|---|---|
| MOUSE-VLXF2P3RV | TRAV15-1/DV6-1*02 | 292 nt | bases differ | 2013-01-20 |
| Species | Mus musculus (NCBITAXON:10090) |
|---|---|
| Locus / type | TRA / V |
| Functional i | None |
| Length | 292 nt |
| Protein UID i | MOUSE-VP-M4U7UN (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Published by the source, and consistent with the nucleotide sequence above. i
Name history i: re-cut from TRAV15-1/DV6-1*02 (292 nt);
Allele names i
Every name below denotes this exact sequence (MOUSE-VHPXHPAB2). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| TRAV15-1/DV6-1*02 | IMGT | IMGT |
Other names & identifiers
Alternative and former names, e.g. IMGT clone names, plus accession identifiers.
| Name | Kind | Source(s) |
|---|---|---|
| MG989839.1 | NCBI accession | ncbi_nucleotide |
External records i
NCBI nucleotide: link IMGT: TRAV15-1/DV6-1*02
Contributed by IMGT, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/MOUSE-VHPXHPAB2/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases