MOUSE-VIC2FK4SW
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGHV5S4*01: a Mus musculus IGH V allele sequence, 294 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Mus musculus (NCBITAXON:10090) |
|---|---|
| Locus / type | IGH / V |
| Functional i | True |
| Length | 294 nt |
| Protein UID i | MOUSE-VP-ZCTFDQ (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Published by the source, and consistent with the nucleotide sequence above. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (MOUSE-VIC2FK4SW). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGHV5S4*01 | IMGT | IMGT |
Other names & identifiers
Alternative and former names, e.g. IMGT clone names, plus accession identifiers.
| Name | Kind | Source(s) |
|---|---|---|
| X03399.1 | NCBI accession | ncbi_nucleotide |
External records i
NCBI nucleotide: link GenBank: GENBANK:X03399 GenBank: GENBANK:X03399.1 IMGT: IGHV5S4*01
Literature references i
PubMed publications linked to this allele.
| PMID | Title | Evidence | Source |
|---|---|---|---|
| 6098462 | verified | ncbi_nucleotide |
Contributed by IMGT, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/MOUSE-VIC2FK4SW/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases