MOUSE-VJU6KLRTN
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
a Mus musculus IGK V allele sequence, 285 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
A newer source record exists for this allele designation. IGKV6-13*01 is still published by IMGT as MOUSE-VAT4A5H3Y, 287 nt, which contains this sequence. This is the earlier record (285 nt). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.
| Species | Mus musculus (NCBITAXON:10090) |
|---|---|
| Locus / type | IGK / V |
| Functional i | None |
| Length | 285 nt |
| Protein UID i | MOUSE-VP-HAH7U7 (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: formerly IGKV6-13*01 (to 2013-01-20); superseded by IGKV6-13*01 (287 nt);
Allele names i
Every name below denotes this exact sequence (MOUSE-VJU6KLRTN). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGKV0-N7JM*00 | IgLabel | OGRDB |
Former IMGT names i
| Former name | Last seen in IMGT release |
|---|---|
| IGKV6-13*01 | 2013-01-20 |
External records i
OGRDB: IGKV0-N7JM*00
Literature references i
PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.
| PMID | Title | Evidence | Source |
|---|---|---|---|
| 28899929 | Pathogen-specific B-cell receptors drive chronic lymphocytic leukemia by light-chain-dependent cross-reaction with autoantigens. | name mentioned* | literature_supp |
| 29545810 | Repertoire Analysis of Antibody CDR-H3 Loops Suggests Affinity Maturation Does Not Typically Result in Rigidification. | name mentioned* | literature_supp |
| 36473496 | Antibody feedback regulates immune memory after SARS-CoV-2 mRNA vaccination. | name mentioned* | literature_supp |
| 37938344 | Role of affinity in plasma cell development in the germinal center light zone. | name mentioned* | literature_supp |
| 41410768 | Convergent mutation trajectories convert functional self-tolerance in IGHV4-34 B cells to genetic tolerance encoded in the antibody. | name mentioned* | literature_supp |
* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.
Contributed by IMGT, OGRDB. See Sources & citations for each source's version, citation and licence.
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/MOUSE-VJU6KLRTN/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases