AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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MOUSE-VLCFF4E2Z

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMus musculus LocusTRA TypeV FunctionalNone Length156 nt

TRAV7-3*02: a Mus musculus TRA V allele sequence, 156 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Earlier records of this allele i

IMGT has published this allele name over more than one sequence extent. Earlier sequence extents are deferred from default search results but remain resolvable, so a paper that cited one still leads here.

RecordNameLengthRelation to this recordIMGT releases
MOUSE-VCMCMV6W3 TRAV7-3*02 162 nt contains this record 2013-01-20–2015-03-19
SpeciesMus musculus (NCBITAXON:10090)
Locus / typeTRA / V
Functional iNone
Length156 nt
Protein UID iMOUSE-VP-XYPWZF (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

156 nt
ATTCTGGGAAAGCCCCCAAGGCACTGATGTCCATCTTCTCCAATGGTGAAAAAGAAGAAGGCAGATTCACAATTCACCTCAATAAAGCCAGTCTGCATTTCTCCCTGCACATCAGAGACTCCCAGCCCAGTGACTCTGCTCTCTACCTCTGTGCAG

Amino-acid sequence (V-REGION)

51 aa
SGKAPKALMSIFSNGEKEEGRFTIHLNKASLHFSLHIRDSQPSDSALYLCA

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: re-cut from TRAV7-3*02 (162 nt);

Allele names i

Every name below denotes this exact sequence (MOUSE-VLCFF4E2Z). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRAV7-3*02 IMGT IMGT

External records i

IMGT: TRAV7-3*02

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/MOUSE-VLCFF4E2Z/similar?min_identity=0.95&kind=nt.