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MOUSE-VTDAMPJNE

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

StatusArchived · seen 2023-02-20 SpeciesMus musculus LocusIGK TypeV FunctionalNone Length232 nt RecordSuperseded

a Mus musculus IGK V allele sequence, 232 nt, not recorded, archived. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

A newer source record exists for this allele designation. IGKV13-71-1*02 is still published by IMGT as MOUSE-VWYYLV7DD, 280 nt, which contains this sequence. This is the earlier record (232 nt, current in IMGT releases 2023-02-20). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.

SpeciesMus musculus (NCBITAXON:10090)
Locus / typeIGK / V
Functional iNone
Length232 nt
Protein UID iMOUSE-VP-ZIWRV2 (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

232 nt
GGCATCAAGTTGACCCAATTCCCATCCTACTCATCTGCATATATAGAGGAGAGAGTCACTATTAATTGCATGACAAGTTAGGAGATTACTATATCATTAGCTTGATATCAGCAGAAACAAAGGAATGCTCCTAAACTCCTCGTATACCACACATTCGGGTTGAAATCAGGGGTTCCTCCAGGGGTTAGAAGTAGTGGATCATTTTGTAGATTCATATTTTCTATTTTTCATC

Amino-acid sequence (V-REGION)

77 aa
GIKLTQFPSYSSAYIEERVTINCMTS*EITISLA*YQQKQRNAPKLLVYHTFGLKSGVPPGVRSSGSFCRFIFSIFH

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: first seen IMGT 2023-02-20; formerly IGKV13-71-1*02 (to 2023-02-20); superseded by IGKV13-71-1*02 (280 nt); archived — removed from the current IMGT reference, kept reachable;

Allele names i

None.

Former IMGT names i

Former nameLast seen in IMGT release
IGKV13-71-1*022023-02-20

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/MOUSE-VTDAMPJNE/similar?min_identity=0.95&kind=nt.