AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

MOUSE-VTZDD75OE

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMus musculus LocusIGK TypeV FunctionalNone Length280 nt

IGKV13-69-1*01: a Mus musculus IGK V allele sequence, 280 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMus musculus (NCBITAXON:10090)
Locus / typeIGK / V
Functional iNone
Length280 nt
Protein UID iMOUSE-VP-AM4BBT (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

280 nt
GGCATCAAGTTGACCCAATCCCCATCCTACTCATCTGCATATGTAGAAAAGAGAGTCACTATTAATTGCATGACAAGTTGGGAGTTTACTATATCACTAGCTTGATATCAGCACAAAGGAGTGTTCCTACACTCCTCGTATACCAGACATTCAGTTTGAAATCAGGGGTTCCTTCAAGGGTTAGAAGTAGTGGATCATTTTGTAGTTTCATATTATTTTCTATTTTTCATGTGTCCTAGTAGATGGACAATTTTAAAAATAAAAATGAATAGTAATAAAA

Amino-acid sequence (V-REGION)

93 aa
GIKLTQSPSYSSAYVEKRVTINCMTSWEFTISLA*YQHKGVFLHSSYTRHSV*NQGFLQGLEVVDHFVVSYYFLFFMCPSRWTILKIKMNSNK

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (MOUSE-VTZDD75OE). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV13-69-1*01 IMGT IMGT

External records i

IMGT: IGKV13-69-1*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGTCTGGTCACAGTACAGCCATAAAGCCTCCCTCTCAGTTTTTGGTGTTCTTGCTGATTTGGATCCCAGCATAATATTT 70 + 10 nt IMGT MOUSE-LPG2B3

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/MOUSE-VTZDD75OE/similar?min_identity=0.95&kind=nt.