AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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MOUSE-VWNY4V3NV

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMus musculus LocusIGH TypeV FunctionalNone Length306 nt

IGHV10-4*01: a Mus musculus IGH V allele sequence, 306 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Earlier records of this allele i

IMGT has published this allele name over more than one sequence extent. Earlier sequence extents are deferred from default search results but remain resolvable, so a paper that cited one still leads here.

RecordNameLengthRelation to this recordIMGT releases
MOUSE-V5REB7Q5V IGHV10-4*01 299 nt contained in this record 2013-01-20–2015-03-19
SpeciesMus musculus (NCBITAXON:10090)
Locus / typeIGH / V
Functional iNone
Length306 nt
Protein UID iMOUSE-VP-W45JU6 (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

306 nt
GAGGTACAGCTTGTTGGGTCTGGTGAAGGATTGGTGCAGCCTAAAGGGTCACTGAAACACTTGTATTCAGCCTCTGGATTCATCTTCAATACATATACAATGGAATGGGTCTGCCAGGCTTCAAGAAAGGGTCTGGAATGGGTTGCATGCATAAGAAGAAAAAGTAATAATTATGTCACATATACTGATTCAGTGAAAGACAGATTCGCCATCTCCAGAGATGATTCGGAAAGCATGGTCAACCTGCAAATGAACAATTTGAAAAGTGAGGACATAGACCTGTATTAATTACAAGAGATATAGGGG

Amino-acid sequence (V-REGION)

102 aa
EVQLVGSGEGLVQPKGSLKHLYSASGFIFNTYTMEWVCQASRKGLEWVACIRRKSNNYVTYTDSVKDRFAISRDDSESMVNLQMNNLKSEDIDLY*LQEI*G

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: re-cut from IGHV10-4*01 (299 nt);

Allele names i

Every name below denotes this exact sequence (MOUSE-VWNY4V3NV). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGHV10-4*01 IMGT IMGT

External records i

IMGT: IGHV10-4*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsGAAGTCTTCATTGTGTGCCTAGACAAAAACC IMGT MOUSE-RMZW4U

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/MOUSE-VWNY4V3NV/similar?min_identity=0.95&kind=nt.