NMOLERAT-V4NIC4CTH
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
TRBV9*02: a Heterocephalus glaber TRB V allele sequence, 286 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Heterocephalus glaber (NCBITAXON:10181) |
|---|---|
| Locus / type | TRB / V |
| Functional i | None |
| Length | 286 nt |
| Protein UID i | NMOLERAT-VP-NMCM4A (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Published by the source, and consistent with the nucleotide sequence above. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (NMOLERAT-V4NIC4CTH). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| TRBV9*02 | IMGT | IMGT |
External records i
IMGT: TRBV9*02
Literature references i
PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.
| PMID | Title | Evidence | Source |
|---|---|---|---|
| 20566715 | Allelic polymorphism in the T cell receptor and its impact on immune responses. | name mentioned* | literature_supp |
| 22792299 | Unbiased analysis of TCRα/β chains at the single-cell level in human CD8+ T-cell subsets. | name mentioned* | literature_supp |
| 26962778 | High Throughput Sequencing of T Cell Antigen Receptors Reveals a Conserved TCR Repertoire. | name mentioned* | literature_supp |
| 31237075 | Comparative analysis of CDR3 regions in paired human αβ CD8 T cells. | name mentioned* | literature_supp |
| 32286182 | The ABC of Major Histocompatibility Complexes and T Cell Receptors in Health and Disease. | name mentioned* | literature_supp |
| 38615042 | Deep learning predictions of TCR-epitope interactions reveal epitope-specific chains in dual alpha T cells. | name mentioned* | literature_supp |
| 38871688 | Germline-like TCR-α chains shared between autoreactive T cells in blood and pancreas. | name mentioned* | literature_supp |
| 39421738 | scRNA+TCR-seq reveals the pivotal role of dual receptor T lymphocytes in the pathogenesis of Kawasaki disease and during IVIG treatment. | name mentioned* | literature_supp |
| 40877317 | Molecular basis of potent antiviral HLA-C-restricted CD8+ T cell response to an immunodominant SARS-CoV-2 nucleocapsid epitope. | name mentioned* | literature_supp |
* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.
Contributed by IMGT. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACAGCGCTGCATGGTCCCCAGCCTTCTGTACAAAAACA | IMGT | NMOLERAT-RJRSRK |
Leader
Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.
| Leader (exon 1 + exon 2) | Split | Source | Leader UID |
|---|---|---|---|
| ATGGGCTTCTGGTTCTTCTGTTGTGTGGCCCTTTGTCTCCTGAGAGCAGGGCCTGTG | 49 + 8 nt | IMGT | NMOLERAT-LQ2HYA |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/NMOLERAT-V4NIC4CTH/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases