AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

ORANGBOR-VDPKM6QFJ

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesPongo pygmaeus LocusIGL TypeV FunctionalNone Length300 nt

IGLV4-74*02: a Pongo pygmaeus IGL V allele sequence, 300 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesPongo pygmaeus (NCBITAXON:9600)
Locus / typeIGL / V
Functional iNone
Length300 nt
Protein UID iORANGBOR-VP-FVZXWC (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

300 nt
CAGCCTGTGCCGACTCAGTCGACCTCTGCATCTGCCTCCCTGGGAGCCCTGGCCAAGCTCGCCCACACTCAGCAGTCAGCATAGCAGCTATGCCATTGAATGCTTTTGGCAGCAGCCAGGGAAGGCCCATCAGTACCTGATGCAGCTTAAGACTGATGGAAGCCACACCAAGGGGGCTGGGATTCCCAGTCACTAGTTCTCAGTCTCCAGGACTGGAGCTGACCACTGTAGTGTCATTTCTACAATCCCGTCTGAGGATGGAGCTGGCTATATCTGTGGTACAGATTGTAGCATTGGTGT

Amino-acid sequence (V-REGION)

100 aa
QPVPTQSTSASASLGALAKLAHTQQSA*QLCH*MLLAAAREGPSVPDAA*D*WKPHQGGWDSQSLVLSLQDWS*PL*CHFYNPV*GWSWLYLWYRL*HWC

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (ORANGBOR-VDPKM6QFJ). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGLV4-74*02 IMGT IMGT

External records i

IMGT: IGLV4-74*02

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGCCTTGACCCCACTCCTCCTCCTCCTTCTCCTCCTTCACTGCACAGGATCCCTCTGG 49 + 11 nt IMGT ORANGBOR-LMHODB

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/ORANGBOR-VDPKM6QFJ/similar?min_identity=0.95&kind=nt.