AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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ORANGBOR-VJQYMVDIZ

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesPongo pygmaeus LocusIGK TypeV FunctionalNone Length282 nt

IGKV3-69*02: a Pongo pygmaeus IGK V allele sequence, 282 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesPongo pygmaeus (NCBITAXON:9600)
Locus / typeIGK / V
Functional iNone
Length282 nt
Protein UID iORANGBOR-VP-VIGUAV (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

282 nt
GAAATTACGTTGACTCAATCTCCCACCTCTCTGTCTTTGTCTCCAGGGGAAAGAGCCTCCTTCATCTACAGGATCATTCAGAGCACTGGCTGCTCTGACTGACCAGCAGAAACCTGGGCAGGATCCCTAGCTGCTCGTACATAGTGCATTCCCTAGGGCCACTGACATCCCAGTGGGGCTCAGTGGCTGTGAATCTGGGATGTACTTTACTCTCACCAACAGTAACCTGTAACCTGAAGATTTTGTACTTGATTACTCTTACCTGTAGAGTAGTTGGAATTT

Amino-acid sequence (V-REGION)

94 aa
EITLTQSPTSLSLSPGERASFIYRIIQSTGCSD*PAETWAGSLAART*CIP*GH*HPSGAQWL*IWDVLYSHQQ*PVT*RFCT*LLLPVE*LEF

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (ORANGBOR-VJQYMVDIZ). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV3-69*02 IMGT IMGT

External records i

IMGT: IGKV3-69*02

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTTATTCAACATAAAACAAAACCT IMGT ORANGBOR-RF2K77

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGAAGCCCCAGCTCAGCCTGTCTCTTGTTACTCTGGGTCTCAAATAATACTGGA 45 + 11 nt IMGT ORANGBOR-LA5RGM

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/ORANGBOR-VJQYMVDIZ/similar?min_identity=0.95&kind=nt.