AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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ORANGBOR-VKRQDKQK6

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesPongo pygmaeus LocusIGK TypeV FunctionalNone Length295 nt

IGKV2-39*02: a Pongo pygmaeus IGK V allele sequence, 295 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesPongo pygmaeus (NCBITAXON:9600)
Locus / typeIGK / V
Functional iNone
Length295 nt
Protein UID iORANGBOR-VP-SPF42G (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

295 nt
TGACTCAGCCCCCATCCCTCCTGTCTGTGGCCGTGGGTGACAGGGTCTCCATCTCCTGCAAGGCCAGTCACAGTCTCATCCATAGGAATGGAGACATCTACTTGAACGGGTTCCAACAGAAGCCACACCAATCTCCTCAACCACTGATCTTTATATGGTGACAAACAGGGCTCCTGGGTCCCAGCCCGCCTCAGTGGCAGTGGGTCTGTGAGGGAGTTCACACTCACAATCACCAAGGTGGAGCCAGGAGATGTTGCATATTACTTCTGTGAGCAGCACACCCACTGGGACCCTA

Amino-acid sequence (V-REGION)

98 aa
*LSPHPSCLWPWVTGSPSPARPVTVSSIGMETST*TGSNRSHTNLLNH*SLYGDKQGSWVPARLSGSGSVREFTLTITKVEPGDVAYYFCEQHTHWDP

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (ORANGBOR-VKRQDKQK6). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV2-39*02 IMGT IMGT

External records i

IMGT: IGKV2-39*02

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsTACAGTGTAATGACCCTAAACATACACC IMGT ORANGBOR-RJM2AG

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/ORANGBOR-VKRQDKQK6/similar?min_identity=0.95&kind=nt.