AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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ORANGSUM-V2OXC6V4D

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesPongo abelii LocusIGK TypeV FunctionalNone Length301 nt

IGKV2-25*02: a Pongo abelii IGK V allele sequence, 301 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesPongo abelii (NCBITAXON:9601)
Locus / typeIGK / V
Functional iNone
Length301 nt
Protein UID iORANGSUM-VP-6MMGNN (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

301 nt
GATGCTGTGTGACCCAGCCTTCACTCTCCCTGCCCGTCACCCCTGGAGAGCCAGTCTCCATCTCCTGTAGGTCCAGTCACAGCCTCTTTCACAGTAATGGATACACCTATTTGAATTGGGACCTACAGAAGCCAGACCAGCCTCCACGGCTCCTGATTGATTTGGTTTCCAAAAGGGACCCTGGAGTCTCAGACAGGTTCAGTGGCAGTGGGTCGGGGACAGACTTCATGTTTAAAATCAGGAGGATGGATGCTGAGGATGTTGGGGTTTATTGCTGCCAGCAAAGTACACATTATCCTCC

Amino-acid sequence (V-REGION)

99 aa
CCVTQPSLSLPVTPGEPVSISCRSSHSLFHSNGYTYLNWDLQKPDQPPRLLIDLVSKRDPGVSDRFSGSGSGTDFMFKIRRMDAEDVGVYCCQQSTHYP

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (ORANGSUM-V2OXC6V4D). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV2-25*02 IMGT IMGT

External records i

IMGT: IGKV2-25*02

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsTACAATGGTACAGTCCTGAACACAAACC IMGT ORANGSUM-RJBJ2G

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
GTGAGGCTCCCTGCTCAGCTCCCGGGGCTGCTAATGCACTGGGTCCCTGGATCCAATGGA 49 + 11 nt IMGT ORANGSUM-LFD72P

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/ORANGSUM-V2OXC6V4D/similar?min_identity=0.95&kind=nt.