PIG-VORH2F2UM

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesSus scrofa LocusTRB TypeV FunctionalNone Length289 nt

TRBV2-5*01: a Sus scrofa TRB V allele sequence, 289 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Species	Sus scrofa (NCBITAXON:9823)
Locus / type	TRB / V
Functional i	None
Length	289 nt
Protein UID i	PIG-VP-HIOWPJ (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

289 nt

GAACCTGGAGTCAGACAAAGCCCTCGCCACCACATCACAAAGTCGGGACAGAACGTGACTTTGAGGTGTGACCCCATTCCCGGTCATTTGTACATCTGCTGGTACCGACAGACCCTGGGAAAGGGGTGGAGTTTCTGATGTCCATCTATAACAGAGAGCCTCCACAGAATGCCGACTTTTTAACGGAGCGGTTCTCAGCTGAGATGCCTGATGACACGTACCTGACTCTGAAGATCCAGCCTGCAGAGCGGGGAGACTCGGCCCTGTTCCTCTGTGCCAGCAGCTCAGC

Amino-acid sequence (V-REGION)

96 aa

EPGVRQSPRHHITKSGQNVTLRCDPIPGHLYICWYRQTLGKGWSF*CPSITESLHRMPTF*RSGSQLRCLMTRT*L*RSSLQSGETRPCSSVPAAQ

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (PIG-VORH2F2UM). None is canonical; they are labels, and the UID is the key.

Name	Scheme	Source(s)
TRBV2-5*01	IMGT	IMGT

External records i

IMGT: TRBV2-5*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGCCATGCACAGACACCGCCTGCCCTTCCACAAACT	IMGT	PIG-RP75EY

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGGACGGCAGGCTCTTCTGCTGGGCCATCTTTGGGCTCCTGGGAGTAGGCCACATG	49 + 8 nt	IMGT	PIG-LX7IFG

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/PIG-VORH2F2UM/similar?min_identity=0.95&kind=nt.

API: JSON · AIRR AlleleDescription · aliases