AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RABBIT-V7YKZ3UUN

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesOryctolagus cuniculus LocusTRA TypeV FunctionalNone Length247 nt

TRAV35*01: a Oryctolagus cuniculus TRA V allele sequence, 247 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesOryctolagus cuniculus (NCBITAXON:9986)
Locus / typeTRA / V
Functional iNone
Length247 nt
Protein UID iRABBIT-VP-OZBWG7 (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

247 nt
GTCCATTCCATGTAGGGGGAGGAGATCTCTCTGAGCTGAGCTCCTCCAGCACATTTAACTCCCTTTCTGTGGTACAAGCAGGACCCTGGCAAAGGCCTTGTGCTCTTGATACTCTTATACAAGAGTGGTGAAGTGACCGGGAGTGGGAAACTGAAGGCACAGTTTAGCGAAACAAGGAAGCAGAGTTATCTGACTATCTCAGCCTCCAAGCCTGAAGATGCAGGCACCTACTTCTGTGCTGGAGTGG

Amino-acid sequence (V-REGION)

82 aa
VHSM*GEEISLS*APPAHLTPFLWYKQDPGKGLVLLILLYKSGEVTGSGKLKAQFSETRKQSYLTISASKPEDAGTYFCAGV

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RABBIT-V7YKZ3UUN). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRAV35*01 IMGT IMGT

External records i

IMGT: TRAV35*01

Literature references 15 total · 15 name-mentioned* i

PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
22792299 Unbiased analysis of TCRα/β chains at the single-cell level in human CD8+ T-cell subsets. name mentioned* literature_supp
30152754 Human T cell receptor occurrence patterns encode immune history, genetic background, and receptor specificity. name mentioned* literature_supp
31237075 Comparative analysis of CDR3 regions in paired human αβ CD8 T cells. name mentioned* literature_supp
32040512 Very rapid cloning, expression and identifying specificity of T-cell receptors for T-cell engineering. name mentioned* literature_supp
36408799 SARS-CoV-2-specific CD4+ and CD8+ T cell responses can originate from cross-reactive CMV-specific T cells. name mentioned* literature_supp
36923729 Cross-reactivity influences changes in human influenza A virus and Epstein Barr virus specific CD8 memory T cell receptor alpha and beta repertoires between young and old. name mentioned* literature_supp
37287989 Targeting KRASG12V mutations with HLA class II-restricted TCR for the immunotherapy in solid tumors. name mentioned* literature_supp
38762584 Invariant γδTCR natural killer-like effector T cells in the naked mole-rat. name mentioned* literature_supp
38871688 Germline-like TCR-α chains shared between autoreactive T cells in blood and pancreas. name mentioned* literature_supp
39133650 Expansion of the HSV-2-specific T cell repertoire in skin after immunotherapeutic HSV-2 vaccine. name mentioned* literature_supp
39421738 scRNA+TCR-seq reveals the pivotal role of dual receptor T lymphocytes in the pathogenesis of Kawasaki disease and during IVIG treatment. name mentioned* literature_supp
40664667 High-resolution mapping of single cells in spatial context. name mentioned* literature_supp
40866291 Spatial TCR clonality and clonal expansion in the in situ microenvironment of non-small cell lung cancer. name mentioned* literature_supp
41306962 Promiscuous class II-binding SARS-CoV-2-nuc derived vaccine-peptide induced extensive conventional, innate and unconventional T cell responses. name mentioned* literature_supp
41766885 Correction: Promiscuous class II-binding SARS-CoV-2-nuc derived vaccine-peptide induced extensive conventional, innate and unconventional T cell responses. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGTTCCCCCAGCACCTGCAGCCTGGACTCAAACC IMGT RABBIT-RXNEKN

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RABBIT-V7YKZ3UUN/similar?min_identity=0.95&kind=nt.