AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RAT-CG4OPMD6O

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesRattus norvegicus LocusIGL TypeC FunctionalTrue Length315 nt

IGLC1*02, IGLC3*01: a Rattus norvegicus IGL C allele sequence, 315 nt, functional. The nucleotide sequence is below, with every recorded name and its source.

SpeciesRattus norvegicus (NCBITAXON:10116)
Locus / typeIGL / C
Functional iTrue
Length315 nt

Coding sequence (nt)

315 nt c_secreted
GGTCAGCCCAAGTCCACTCCCACACTCACAGTATTTCCACCTTCAACTGAGGAGCTCCAGGGAAACAAAGCCACACTGGTGTGTCTGATTTCTGATTTCTACCCGAGTGATGTGGAAGTGGCCTGGAAGGCAAATGGTGCACCTATCTCCCAGGGTGTGGACACTGCAAATCCCACCAAACAGGGCAACAAATACATCGCCAGCAGCTTCTTACGTTTGACAGCAGAACAGTGGAGATCTCGCAACAGTTTTACCTGCCAAGTTACACATGAAGGGAACACTGTGGAAAAGAGTCTGTCTCCTGCAGAGTGTGTC

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RAT-CG4OPMD6O). None is canonical; they are labels, and the UID is the key.

Multiple allele designations. This one sequence is recorded under 2 different allele designations: IGLC1*02, IGLC3*01. These are identical normalized nucleotide sequences with different attributed names.

NameSchemeSource(s)
IGLC1*02 IMGT IMGT
IGLC3*01 IMGT IMGT

External records i

IMGT: IGLC1*02

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RAT-CG4OPMD6O/similar?min_identity=0.95&kind=nt.