RHESUS-J5SM6EA2A
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGHJ4*01, IGHJ4-3*01: a Macaca mulatta IGH J allele sequence, 48 nt, functional. The nucleotide sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGH / J |
| Functional i | True |
| Length | 48 nt |
Coding sequence (nt)
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-J5SM6EA2A). None is canonical; they are labels, and the UID is the key.
Multiple allele designations. This one sequence is recorded under 2 different allele designations: IGHJ4*01, IGHJ4-3*01. These are identical normalized nucleotide sequences with different attributed names.
| Name | Scheme | Source(s) |
|---|---|---|
| IGHJ4-JSJ6*01 | IgLabel | MUSA, OGRDB |
| IGHJ4*01 | IMGT | IMGT |
| IGHJ4-3*01 | KIMDB | KIMDB |
| IGHJ4*01 | RhGLDB+ | RhGLDB+ |
External records i
genbank:MF989451: GENBANK:MF989451 GenBank: GENBANK:BK063715 IMGT: IGHJ4*01 OGRDB: IGHJ4-JSJ6*01
Literature references i
PubMed publications linked to this allele.
Contributed by IMGT, KIMDB, MUSA, OGRDB, RhGLDB+. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| j_rs | GGTTTTTGTGCACCCCTTAACGGGGCCTCCCACAATGTG | IMGT MUSA | RHESUS-R4TK6U |
| j_rs | GGTTTTTGTGCACCCCTTAATGGGGCCTCCCACAATGTG | MUSA | RHESUS-RSRGHF |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-J5SM6EA2A/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases