AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-JTHZVXC6S

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGL TypeJ FunctionalFalse Length38 nt

IGLJ9-PIRL*01_i0gcatg_c5t_g9a_a10g_g11c_a18c_g23c_a27g_c29t_c30t: a Macaca mulatta IGL J allele sequence, 38 nt, non-functional. The nucleotide sequence is below, with every recorded name and its source.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGL / J
Functional iFalse
Length38 nt

Coding sequence (nt)

38 nt
GCATGTGTTTGGCAGCGGGACCCAGCTCACCGTTTTAG

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-JTHZVXC6S). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGLJ0-YXJH*02 IgLabel OGRDB
IGLJ9-PIRL*01_i0gcatg_c5t_g9a_a10g_g11c_a18c_g23c_a27g_c29t_c30t VDJbase MUSA

External records i

OGRDB: IGLJ0-YXJH*02

Contributed by MUSA, OGRDB. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
j_rsGGTTTCAATCCAAGCATAATTCACCGAG MUSA RHESUS-RNZB4J

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-JTHZVXC6S/similar?min_identity=0.95&kind=nt.