AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

RHESUS-V3P4MGSGL

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGH TypeV FunctionalNone Length303 nt
SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGH / V
Functional iNone
Length303 nt
Protein UID iRHESUS-VP-OH7NVR (shared by alleles with the same V-REGION amino-acid sequence)

Allele names i

Every name below denotes this exact sequence (RHESUS-V3P4MGSGL). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGHV3-39*03 IMGT IMGT

External records i

IMGT: IGHV3-39*03

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACACTGAGGGGAGGTCAGTGTGAGCCCAGACGCAAACC IMGT RHESUS-RB5Y7K

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGT 46 + 11 nt IMGT RHESUS-LDYHPI

Find similar alleles

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-V3P4MGSGL/similar?min_identity=0.95&kind=nt.

Coding sequence (nt)

303 nt
GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCCTGGTCCAGCCTGGGGGGTCCCTGAGACCCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTCTGCTATGCACTGGGTCCGCCAGGCTTCTGGGAAAGGACTGGAGTGGGTTGGCCGCATTAGAAGCAAAATCTAACAGTTACCCGACAGAATACGCCACGTCTGTGAAAGGCTGATTCACCATCTCAAGAGATGATTCAAAGAACCCGGTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTACTAGAGA

Amino-acid sequence (V-REGION)

101 aa
EVQLVESGGGLVQPGGSLRPSCAASGFTFSSSAMHWVRQASGKGLEWVGRIRSKI*QLPDRIRHVCERLIHHLKR*FKEPGVSANEQPENRGHGRVLLY*R

Translated here from the nucleotide sequence; no source published a protein for this allele. i