AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-V5GKLFVQG

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGL TypeV FunctionalTrue Length297 nt
SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGL / V
Functional iTrue
Length297 nt
Protein UID iRHESUS-VP-WFJHYK (shared by alleles with the same V-REGION amino-acid sequence)

Allele names i

Every name below denotes this exact sequence (RHESUS-V5GKLFVQG). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGLV17-2EQO*05 IgLabel MUSA
IGLV2S4*01 IMGT IMGT

Other names & identifiers

Alternative and former names, e.g. IMGT clone names, plus accession identifiers.

NameKindSource(s)
AM055979.1 NCBI accession ncbi_nucleotide

External records i

NCBI nucleotide: link GenBank: GENBANK:AM055979 GenBank: GENBANK:AM055979.1 IMGT: IGLV2S4*01

Literature references 1 total · 1 verified i

PubMed publications linked to this allele.

PMIDTitleEvidenceSource
16189671 verified ncbi_nucleotide

Contributed by IMGT, MUSA, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ACCCTCCTCACTCAGGGCACAGGATCCTGGGCT 22 + 11 nt IMGT RHESUS-L455YO

Find similar alleles

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-V5GKLFVQG/similar?min_identity=0.95&kind=nt.

Coding sequence (nt)

297 nt
CAGGCTGCCCCGACTCAGTCTCCCTCTGTGTCTGGGTCTCCTGGACAGTCGGTCACCATTTCCTGCACTGGAACCAGCAGTGACATTGGTGGTTATAACCGTGTCTCCTGGTACCAACAGCACCCAGGCAAAGCCCCCAAACTCATGATTTATGAGGTCAGTAAGCGGCCCTCAGGGGTCTCTGATCGCTTCTCTGGTTCCAAGTCTGGCAACACGGCCTCCCTGACCATCTCTGGGCTCCAGGCTGAGGACGAGGCTGATTATTACTGCAGCTCATATGCAGGTAGTGGTACTTTC

Amino-acid sequence (V-REGION)

99 aa
QAAPTQSPSVSGSPGQSVTISCTGTSSDIGGYNRVSWYQQHPGKAPKLMIYEVSKRPSGVSDRFSGSKSGNTASLTISGLQAEDEADYYCSSYAGSGTF

Published by the source, and consistent with the nucleotide sequence above. i