AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-V5VLNDL6G

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusTRB TypeV FunctionalNone Length254 nt

TRBV6-2-1*01: a Macaca mulatta TRB V allele sequence, 254 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeTRB / V
Functional iNone
Length254 nt
Protein UID iRHESUS-VP-ZRJZHW (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

254 nt
AATGCTGGTGTCACTCAGAGCCCAAAATTCCAGATCCTGAAGACAGGACAGAGCATGACACTGCAGTGTGCCCAGGATATGAACCATGACTCCATGTACTGGTATCGACAAGACCCAGGCATGGGGCTGAGGCTGATTCATTACTCAGCTACCGAGGATACCACTGACCCAGGAGAAGTCCCCGATGGCTACAGTGTCTCCAGATTAAACAAAAAGGAGTTCCTGCTCAGGCTGGAGTCGGCTGCTCCCTCCCA

Amino-acid sequence (V-REGION)

84 aa
NAGVTQSPKFQILKTGQSMTLQCAQDMNHDSMYWYRQDPGMGLRLIHYSATEDTTDPGEVPDGYSVSRLNKKEFLLRLESAAPS

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-V5VLNDL6G). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRBV6-2-1*01 IMGT IMGT

External records i

IMGT: TRBV6-2-1*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGAGCATCAAGCTCCTGTGCTGTGTGGCCTTTTCTCTCCTGTGGCCAGGTCCAGTG 49 + 8 nt IMGT RHESUS-L4G3MP

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-V5VLNDL6G/similar?min_identity=0.95&kind=nt.