AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-V5ZARXVZB

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGK TypeV FunctionalNone Length301 nt

IGKV2-61*02: a Macaca mulatta IGK V allele sequence, 301 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGK / V
Functional iNone
Length301 nt
Protein UID iRHESUS-VP-QPINDY (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

301 nt
GATATTGTGATGACCCAGACTCCACTCTCCCTGCCAGTCACCCCTGGAGAGCCGGCCTCCATCTCCTGCAGGTCTAGTCAGAGCCTCCTGCATACTGATGGTATACCTATTTGGATTGGTACCTGCAGAAGCCAGGCCAGTCTCCGCAGCTCCTGATTTATGGGGGTTCCAACAGAGCCTCTGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGCACTGATTTCACACTGAAAATCAGCAAGGTGGAGGCGGAGGATGTTGGGGTTTATTACTGCATGCAACATAAAGCGCTTCCTCC

Amino-acid sequence (V-REGION)

100 aa
DIVMTQTPLSLPVTPGEPASISCRSSQSLLHTDGIPIWIGTCRSQASLRSS*FMGVPTEPLESQTGSVAVGQALISH*KSARWRRRMLGFITACNIKRFL

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: formerly IGKV2-2*01 (to 2016-12-19);

Allele names i

Every name below denotes this exact sequence (RHESUS-V5ZARXVZB). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV2-61*02 IMGT IMGT

Former IMGT names i

Former nameLast seen in IMGT release
IGKV2-2*012016-12-19

External records i

IMGT: IGKV2-61*02

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACGGTGGTACAGACCAATACAGAAACC IMGT RHESUS-RBCJRN

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGAGGCTCCCTGCTCAGCTCCTGGGGCTGCTGATGCTCTGGGTCCCTGGATCCGGTGGG 49 + 11 nt IMGT RHESUS-LU4JLP

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-V5ZARXVZB/similar?min_identity=0.95&kind=nt.