AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-V6663AQ3E

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGK TypeV FunctionalFalse Length299 nt

IGKV2-2*02: a Macaca mulatta IGK V allele sequence, 299 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGK / V
Functional iFalse
Length299 nt
Protein UID iRHESUS-VP-V6GSEB (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

299 nt
GTTATTGTGATGACCCGGATTCCACTCTCCCTGCCCGTCACCCCTGGAGAGCCAGCCTCCATCTCCTACAAGTCTAGTTAGAGCCTCCTGCATAGTGATGAATACACCTATTTGCATTGGTACCTGCAGAAGCCAGGCTAGTTTCCACAGCTCCTGATCTATGGTGTTTCCAACCAGTTCTGGCTCCCAGACAGGTTCAGTGGCAGTGAGTTAGGCACAGACTTCACACTGAAAGTCAGCAGAGTGGAGGTTGAGGATGTTGGGATTTATCACTACTTGCAAGGTACACAATCTCTTCA

Amino-acid sequence (V-REGION)

99 aa
VIVMTRIPLSLPVTPGEPASISYKSS*SLLHSDEYTYLHWYLQKPG*FPQLLIYGVSNQFWLPDRFSGSELGTDFTLKVSRVEVEDVGIYHYLQGTQSL

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-V6663AQ3E). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV2-2*02 IgLabel MUSA
IGKV2-2*02 IMGT IMGT

Other names & identifiers

Alternative and former names, e.g. IMGT clone names, plus accession identifiers.

NameKindSource(s)
NW_001099007.1 NCBI accession ncbi_nucleotide

External records i

NCBI nucleotide: link NCBI Gene: NCBIGENE:701244 GenBank: GENBANK:NW_001099007 IMGT: IGKV2-2*02

Contributed by IMGT, MUSA, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGATACAGTTCCGAACCTAAGCT IMGT RHESUS-R5AGD5

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ACGAGACTGCCTGCTCAGCTCCTGGGGCTGTTGATGCTCTGGGTCTCCGGATTCATTAGG 49 + 11 nt IMGT RHESUS-LNZLPZ

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-V6663AQ3E/similar?min_identity=0.95&kind=nt.