RHESUS-V7C45XNYO

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGH TypeV FunctionalFalse Length313 nt

IGHV4-5TXH*02_i0ga_g3a_g4c_7--tg10_12ttctc16_g18t_20gccct24_c26t_a27t_a33g_g36t_t45c_g48a_g49c_g57c_c65t_c69t_g80c_t81a_a83t_i90aca_g101c_g107c_t109c_a110c_a113g_g119t_g128a_c129t_c136g_g145a_g146a_t149c_g150a_g153c_t159c_g160a_a164g_t167c_c168a_a169g_t172c_i174g_t186g_g188a_a190t_c195a_g197c_a200-_c201-_g207a_t208c_c209t_i215gag_g224c_t227g_t234c_a237c_g239a_g241t_a242c_g246a_i247g_c249a_g252a_c255a_c261t_c263t_g267a_a268c_c278a_t279c_g280c_c284a_g286a_c287a_c290a_g292t_297attaa301_g303-_t304a_t306g_t310a_312ccatta317_319tttttataaaataa332: a Macaca mulatta IGH V allele sequence, 313 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Species	Macaca mulatta (NCBITAXON:9544)
Locus / type	IGH / V
Functional i	False
Length	313 nt
Protein UID i	RHESUS-VP-SQBRPU (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

313 nt

GACAACTGTGTTTCTCATTGCCCTCTTGGGCTTGTGAAGCCCTCACAGACCCTCTCCCTCATCTGTGCTGTCTCTGCATTCTCCATCACAACCAGTGCTCCCTGCTGGATCTGGATCCATCAGCCCGCAGGGAAGAAACCAGACTGGATCAGGTGCACAGCTCATGAGGGAGTGCACAACCTAACCCACTCCTCAAGAGGAGTCCAGGCACCATCTCCAAATCCACATGCAAAAAAACAGTTTTTCCTACAGCTGAGCTACCTGAACAACGAGTACACATTAATAAGTACAGCCATTAATTTTTATAAAATAA

Amino-acid sequence (V-REGION)

104 aa

DNCVSHCPLGLVKPSQTLSLICAVSAFSITTSAPCWIWIHQPAGKKPDWIRCTAHEGVHNLTHSSRGVQAPSPNPHAKKQFFLQLSYLNNEYTLISTAINFYKI

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-V7C45XNYO). None is canonical; they are labels, and the UID is the key.

Name	Scheme	Source(s)
IGHV4-5TXH*02_i0ga_g3a_g4c_7--tg10_12ttctc16_g18t_20gccct24_c26t_a27t_a33g_g36t_t45c_g48a_g49c_g57c_c65t_c69t_g80c_t81a_a83t_i90aca_g101c_g107c_t109c_a110c_a113g_g119t_g128a_c129t_c136g_g145a_g146a_t149c_g150a_g153c_t159c_g160a_a164g_t167c_c168a_a169g_t172c_i174g_t186g_g188a_a190t_c195a_g197c_a200-_c201-_g207a_t208c_c209t_i215gag_g224c_t227g_t234c_a237c_g239a_g241t_a242c_g246a_i247g_c249a_g252a_c255a_c261t_c263t_g267a_a268c_c278a_t279c_g280c_c284a_g286a_c287a_c290a_g292t_297attaa301_g303-_t304a_t306g_t310a_312ccatta317_319tttttataaaataa332	VDJbase	MUSA

Contributed by MUSA. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	AACACAGTGAGGGGAAATCAATTGTGAGTTCAGAAGCA	MUSA	RHESUS-RG34KN

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGAGGTGTAGAAGTTGCATGTATATTGTGGATATTAACACTTTTTCAGAACCTGTGCATGCC	46 + 17 nt	MUSA	RHESUS-L5XQWG

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-V7C45XNYO/similar?min_identity=0.95&kind=nt.

API: JSON · AIRR AlleleDescription · aliases