AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-V7YH5GT2S

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGL TypeV FunctionalTrue Length284 nt
SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGL / V
Functional iTrue
Length284 nt
Protein UID iRHESUS-VP-PASTFV (shared by alleles with the same V-REGION amino-acid sequence)

Allele names i

Every name below denotes this exact sequence (RHESUS-V7YH5GT2S). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGLV12-RLSR*02 IgLabel OGRDB
IGLV12-RLSR*01_g27a VDJbase MUSA

External records i

OGRDB: IGLV12-RLSR*02

Contributed by MUSA, OGRDB. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGACACAGGCAGATGGGGAAATGAGACATAAACC MUSA RHESUS-RVMGGP

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGCCTGGATCCCTCTCCTGCTCCCCCTCCTCGCTCTCTGCACAGGTTCTCTGTGGCT 48 + 11 nt MUSA RHESUS-LJLNKG

Find similar alleles

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-V7YH5GT2S/similar?min_identity=0.95&kind=nt.

Coding sequence (nt)

284 nt
TCCTATGAGCTGACACAGCCACCCTCAGTGTCAGTGTCTCCCGGACAGACGGCCAAGATCACCTGCTCTGGAGAAATACTGGCAAAAAAATATGCTCGGTGGTTCCAGCAGAAGCCAGGCCAGGCCCCTGTGCTGGTGATTTATAAAGACAGTGAGCGCCCCTCAGGGATTCCTGAACGTTTCTCTGGCTCCAGCTCAGGGACCACAGTCACCCTGACCGTCAGTGGGGCCCAGGCTGAGGATGAGGCTGACTATTACTGTTACTCTGGGGATGACAACAATCT

Amino-acid sequence (V-REGION)

94 aa
SYELTQPPSVSVSPGQTAKITCSGEILAKKYARWFQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTVSGAQAEDEADYYCYSGDDNN

Translated here from the nucleotide sequence; no source published a protein for this allele. i