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RHESUS-VA3CFI45I

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGH TypeV FunctionalNone Length296 nt

IGHV4-NL_1*01_S5917: a Macaca mulatta IGH V allele sequence, 296 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGH / V
Functional iNone
Length296 nt
Protein UID iRHESUS-VP-EOIW4R (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

296 nt
CAGCTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGCTACTGGAGCTGGATCCGCCAGGCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATGGTAGTGGTAGTAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCCTGTCAGTAGACACGTCCAAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGA

Amino-acid sequence (V-REGION)

98 aa
QLQLQESGPGLVKPSETLSLTCAVSGGSISSSYWSWIRQAPGKGLEWIGYIYGSGSSTNYNPSLKSRVTLSVDTSKNQLSLKLSSVTAADTAVYYCAR

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-VA3CFI45I). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGHV4-36BV*21 IgLabel MUSA
IGHV4-5WKJ*37 IgLabel OGRDB
IGHV4-NL_1*01_S5917 KIMDB KIMDB

External records i

OGRDB: IGHV4-5WKJ*37

Literature references 1 total · 1 sequence-in-paper i

PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence.

PMIDTitleEvidenceSource
35419009 Addressing IGHV Gene Structural Diversity Enhances Immunoglobulin Repertoire Analysis: Lessons From Rhesus Macaque. sequence in paper literature_supp

Contributed by KIMDB, MUSA, OGRDB. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VA3CFI45I/similar?min_identity=0.95&kind=nt.