AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-VAF7BI7Z5

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGK TypeV FunctionalNone Length277 nt RecordSuperseded

a Macaca mulatta IGK V allele sequence, 277 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

A newer source record exists for this allele designation. IGKV1-6*01 is still published by IMGT as RHESUS-VPHPVR47C, 287 nt, whose bases differ from this one. This is the earlier record (277 nt). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGK / V
Functional iNone
Length277 nt
Protein UID iRHESUS-VP-7IGVNM (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

277 nt
CACACTCAGATGACCCAGACTCGGTCCTCCCTGTCTGAATCATTAGGAGACAGTCACCATTACTTGCTGGGCAAGTCAGGTATCAACAATATTTTAAACTGGTATCAGCAGAAACCAGGGAAACCGTGTAAACTCCTGATCTATAAGGCATCCAATTTGCAATCTGAAGTCCCATCTAGATTCAGTGGCAGTGGATCTGGGACAGACTTTGCTCTCACTATCAACAGTCTGCAGCCTGAAGATATTGCAGCTTATTACTGTCTACAGAGTTACAGTA

Amino-acid sequence (V-REGION)

92 aa
HTQMTQTRSSLSESLGDSHHYLLGKSGINNILNWYQQKPGKPCKLLIYKASNLQSEVPSRFSGSGSGTDFALTINSLQPEDIAAYYCLQSYS

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: formerly IGKV1-6*01 (to 2015-03-19); superseded by IGKV1-6*01 (287 nt);

Allele names i

None.

Other names & identifiers

Alternative and former names, e.g. IMGT clone names, plus accession identifiers.

NameKindSource(s)
MW176984.1 NCBI accession ncbi_nucleotide

Former IMGT names i

Former nameLast seen in IMGT release
IGKV1-6*012015-03-19

External records i

NCBI nucleotide: link

Contributed by IMGT, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VAF7BI7Z5/similar?min_identity=0.95&kind=nt.