RHESUS-VC22XGRD3

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusTRA TypeV FunctionalTrue Length273 nt

TRAV25*02: a Macaca mulatta TRA V allele sequence, 273 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Species	Macaca mulatta (NCBITAXON:9544)
Locus / type	TRA / V
Functional i	True
Length	273 nt
Protein UID i	RHESUS-VP-JDWLOD (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

273 nt

GGACAACAAATAATGCAAATTCCTCAGTACCAGCATGTACAAGAAGGAGAGGACTTCACCACGTACTGCAATTCCTCAACTACTTTAAGCAATATACAGTGGTATAAGCAAAGGCCTGGGGGACATCCCGTTTTTTTGATAACGTTAGTGAAGAGTGGAGAAGTGAAGAAGCAGAAAAGACTGACATTTCAGTTTGGAGAAGCAAAAAAGAACAGCTCCCTGCACATCACAGCCACCCAGACTACAGATGTAGGAACCTACTTCTGCGCAGGG

Amino-acid sequence (V-REGION)

91 aa

GQQIMQIPQYQHVQEGEDFTTYCNSSTTLSNIQWYKQRPGGHPVFLITLVKSGEVKKQKRLTFQFGEAKKNSSLHITATQTTDVGTYFCAG

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-VC22XGRD3). None is canonical; they are labels, and the UID is the key.

Name	Scheme	Source(s)
TRAV25*02	IMGT	IMGT

External records i

IMGT: TRAV25*02

Literature references 1 total · 1 sequence-in-paper i

PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence.

PMID	Title	Evidence	Source
36096729	Identification and characterization of the T cell receptor (TCR) repertoire of the cynomolgus macaque (Macaca Fascicularis).	sequence in paper	literature_supp

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGTGCTCCCCAAGCACCTGCTGCCTGTGTCCAAATC	IMGT	RHESUS-RHBS45

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGCTACTCATCACATCAGTGTTGGTCTTATGGATGCAATTGTCACAGGTGAAT	46 + 8 nt	IMGT	RHESUS-L7Q6CX

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VC22XGRD3/similar?min_identity=0.95&kind=nt.

API: JSON · AIRR AlleleDescription · aliases