RHESUS-VCNWHEQXG

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGK TypeV FunctionalTrue Length287 nt

Species	Macaca mulatta (NCBITAXON:9544)
Locus / type	IGK / V
Functional i	True
Length	287 nt
Protein UID i	RHESUS-VP-N4UKSK (shared by alleles with the same V-REGION amino-acid sequence)

Allele names i

Every name below denotes this exact sequence (RHESUS-VCNWHEQXG). None is canonical; they are labels, and the UID is the key.

Name	Scheme	Source(s)
IGKV3-6P57*08	IgLabel	MUSA
IGKV3-LU4T*09	IgLabel	OGRDB
IGKV3-24*04	IMGT	IMGT

Other names & identifiers

Alternative and former names, e.g. IMGT clone names, plus accession identifiers.

Name	Kind	Source(s)
AY963764.1	NCBI accession	ncbi_nucleotide

External records i

NCBI nucleotide: link GenBank: GENBANK:AY963764 GenBank: GENBANK:AY963764.1 IMGT: IGKV3-24*04 OGRDB: IGKV3-LU4T*09

Literature references 3 total · 1 verified · 2 name-mentioned* i

PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMID	Title	Evidence	Source
15900492		verified	ncbi_nucleotide
38707998	Maintenance of caecal homeostasis by diverse adaptive immune cells in the rhesus macaque.	name mentioned^*	literature_supp
39341987	Full-length single-cell BCR sequencing paired with RNA sequencing reveals convergent responses to pneumococcal vaccination.	name mentioned^*	literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT, MUSA, OGRDB, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGCGATTCAACCTGAAACAAAAACC	MUSA	RHESUS-RTPWBA

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
TTCCTCCTGCTACCTTGGCTCCCAGATACCACCGGA	25 + 11 nt	IMGT	RHESUS-LEKOZI
ATGGAAGCCCCAGCACAGCTTCTCTTCCTCCTGCTACCTTGGCTCCCAGGTATACCACCGGA	51 + 11 nt	MUSA	RHESUS-LIHWAE

Find similar alleles

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VCNWHEQXG/similar?min_identity=0.95&kind=nt.

Coding sequence (nt)

287 nt

GAAATAGTGATGACGCAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCTGCAGGGCCAGTCAGAGTGTTGGCAGCAGCTTAGCCTGGTACCAGCAGAAACCTGGGCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGCGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGGAGCCTGAAGATGTTGCAGTTTATTACTGTCTGCAGCGTAGTAACTGGCCTCA

Amino-acid sequence (V-REGION)

95 aa

EIVMTQSPATLSLSPGERATLSCRASQSVGSSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISSLEPEDVAVYYCLQRSNWP

Published by the source, and consistent with the nucleotide sequence above. i

API: JSON · AIRR AlleleDescription · aliases