AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-VDLW2R76O

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGK TypeV FunctionalNone Length286 nt
SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGK / V
Functional iNone
Length286 nt
Protein UID iRHESUS-VP-CXQCM2 (shared by alleles with the same V-REGION amino-acid sequence)

Allele names i

Every name below denotes this exact sequence (RHESUS-VDLW2R76O). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV1-46*02 IMGT IMGT

Former IMGT names i

Former nameLast seen in IMGT release
IGKV1-7*012015-03-19

External records i

IMGT: IGKV1-46*02

Literature references 1 total · 1 name-mentioned* i

PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
41021799 Molecular divergence and convergence of mammalian antibody responses to the influenza virus hemagglutinin stem. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGTTACACACCTAAACATAAACC IMGT RHESUS-RHPZCB

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGACAGGAGGGTCCCCACTCAGCTCCTGGGCTTCCTGTCGCTCTGGCTCTCAGGAGTCAGAGGT 55 + 11 nt IMGT RHESUS-LARAC3

Find similar alleles

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VDLW2R76O/similar?min_identity=0.95&kind=nt.

Coding sequence (nt)

286 nt
GACATACAGATGACCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGTGTCACCATCACTTGCCGGGCAAGTCAGAGCTTTAGTAGTAGTTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCTATAGTGCATCCAGTTTGCAATCTGGGGTTCCTTCGAGGTTCAGTGGCAGTAAGTCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATATTGCTAGTTATTACTGTCAACAGTATTACAGTTACCCTCC

Amino-acid sequence (V-REGION)

94 aa
HTDDQSPSSLSASVGDSVTITCRASQSFSSSLAWYQQKPGKAPKLLIYSASSLQSGVPSRFSGSKSGTDFTLTISSLQPEDIASYYCQQYYSYP

Translated here from the nucleotide sequence; no source published a protein for this allele. i