RHESUS-VFP2IJZNB

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGH TypeV FunctionalNone Length293 nt

Species	Macaca mulatta (NCBITAXON:9544)
Locus / type	IGH / V
Functional i	None
Length	293 nt
Protein UID i	RHESUS-VP-HFDBTO (shared by alleles with the same V-REGION amino-acid sequence)

Allele names i

Every name below denotes this exact sequence (RHESUS-VFP2IJZNB). None is canonical; they are labels, and the UID is the key.

Multiple allele designations. This one sequence is recorded under 2 different allele designations: IGHV4-92*04, LJI.Rh_IGHV4.61.2. These are identical normalized nucleotide sequences with different attributed names.

Name	Scheme	Source(s)
IGHV11-3ZCZ*01	IgLabel	MUSA
IGHV4-92*04	IMGT	IMGT
LJI.Rh_IGHV4.61.2	RhGLDB+	RhGLDB+

External records i

IMGT: IGHV4-92*04

Literature references 2 total · 1 verified · 1 sequence-in-paper i

PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence.

PMID	Title	Evidence	Source
31080066		verified	MUSA
32866207	Mapping the immunogenic landscape of near-native HIV-1 envelope trimers in non-human primates.	sequence in paper	literature_supp

Contributed by IMGT, MUSA, RhGLDB+. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGTGAGGGGAGGTGGGTGTGAGCCCAGACACAAACC	IMGT	RHESUS-RRLVV2

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGAAGCACCTGTGGTTCTTCCTTCTCCTGGTGGCAGCTCCCAGATGGGTCCTGTCC	46 + 11 nt	IMGT	RHESUS-L3JIBL

Find similar alleles

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VFP2IJZNB/similar?min_identity=0.95&kind=nt.

Coding sequence (nt)

293 nt

CAGGTGCAGCTGCAGGAGTCGGGCCCAGGACTGGTGAAGCCTTCGGAGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGACTGGAGTGGATTGGACGTATCTCTGGTAGTGGAGCACCAGCTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAAAGACACGTCCAAGAATCAGTTTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACCGCCGTGTATTACTGTGCGAGAGA

Amino-acid sequence (V-REGION)

97 aa

QVQLQESGPGLVKPSETLSLTCAVSGGSISSSNWWSWIRQSPGKGLEWIGRISGSGAPATTPPSRVESPFQRHVQESVSLKLSSVTAADTAVYYCAR

Translated here from the nucleotide sequence; no source published a protein for this allele. i

API: JSON · AIRR AlleleDescription · aliases