AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-VG6TNIEBE

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGK TypeV FunctionalTrue Length285 nt

IGKV1-AEA*01_S8672: a Macaca mulatta IGK V allele sequence, 285 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGK / V
Functional iTrue
Length285 nt
Protein UID iRHESUS-VP-QCIFNS (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

285 nt
GACATCCAGATGACCCAGTCTCCATCCTCCCTGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGCCAGGCGAGTCAGGGCATTAGCAATAATTTAGCCTGGTATCAGCAGAAACCGGGGAAAGCCCCTAAGCTCCTGATCTATAAGGCATCCACTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGTGGATCTGGGACAGATTTCACTCTCACCATCAGCAGCCTGCAGCCTGAAGATTTTGCAACTTATTACTGTCAGCATGGTTATGGTATCCTC

Amino-acid sequence (V-REGION)

95 aa
DIQMTQSPSSLSASVGDRVTITCQASQGISNNLAWYQQKPGKAPKLLIYKASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHGYGIL

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-VG6TNIEBE). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV1-43MA*02 IgLabel MUSA
IGKV1-HJDQ*06 IgLabel OGRDB
IGKV1-AEA*01_S8672 RhGLDB+ RhGLDB+

External records i

OGRDB: IGKV1-HJDQ*06

Contributed by MUSA, OGRDB, RhGLDB+. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGTTACAAGTCATAACATAAACC MUSA RHESUS-R3FB2W

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGACATGAGGGCCCCCACTCAGCTCCTGGGGTTCCTGCTGCTCTGGCTCCCAGGTGTGCCAGATGT 57 + 11 nt MUSA RHESUS-LN6ASS
ATGGACATGAGGGCCCCCACTCAGCTCTTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGTGCCAGATGT 57 + 11 nt MUSA RHESUS-LZFL2F

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VG6TNIEBE/similar?min_identity=0.95&kind=nt.