AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

RHESUS-VGOMNXR63

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

StatusArchived · seen 2013-01-20 → 2016-12-19 SpeciesMacaca mulatta LocusTRB TypeV FunctionalNone Length282 nt RecordSuperseded

a Macaca mulatta TRB V allele sequence, 282 nt, not recorded, archived. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

A newer source record exists for this allele designation. TRBV7-1*01 is still published by IMGT as RHESUS-VRSI3BRRG, 290 nt, which contains this sequence. This is the earlier record (282 nt, current in IMGT releases 2013-01-20–2016-12-19). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeTRB / V
Functional iNone
Length282 nt
Protein UID iRHESUS-VP-IXM76F (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

282 nt
AGTCTCCCAGTCCCTGAGACACAAGGTAGCAAAGAAGAGAAAGGATGTAGCTCTCAGATATGATCCAATTTCAGGTCATAATGTCCTTTATTGATAACGACAGAGCCTGGGGCAGGGCCTGGAGTTTCCAATTTACTTCCAAGACAAGGATGCAGCAGACAAACTGGGGCTTCCCCGTGATTGGTTCTCTGCAGAGAGGCCTGAGGGATCTGTCTGCATTCTGAAGATCAAGCGCACACAGCAGGGGGACTCGGCCGTGTATCTCTGTGCCAGCAGCTCAGC

Amino-acid sequence (V-REGION)

94 aa
SLPVPETQGSKEEKGCSSQI*SNFRS*CPLLITTEPGAGPGVSNLLPRQGCSRQTGASP*LVLCREA*GICLHSEDQAHTAGGLGRVSLCQQLS

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: first seen IMGT 2013-01-20; formerly TRBV7-1*01 (to 2013-01-20); superseded by TRBV7-1*01 (290 nt); archived — removed from the current IMGT reference, kept reachable;

Allele names i

None.

Former IMGT names i

Former nameLast seen in IMGT release
TRBV7-1*012013-01-20

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VGOMNXR63/similar?min_identity=0.95&kind=nt.