RHESUS-VHQYDCR44
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGH / V |
| Functional i | True |
| Length | 296 nt |
| Protein UID i | RHESUS-VP-I5SODP (shared by alleles with the same V-REGION amino-acid sequence) |
Allele names i
Every name below denotes this exact sequence (RHESUS-VHQYDCR44). None is canonical; they are labels, and the UID is the key.
Multiple allele designations. This one sequence is recorded under 2 different allele designations: IGHV3-73*01_W7650, IGHV-SSII_S0244. These are identical normalized nucleotide sequences with different attributed names.
| Name | Scheme | Source(s) |
|---|---|---|
| IGHV3-73*01_W7650 | Guo | Guo |
| IGHV3-2RXM*03 | IgLabel | MUSA |
| IGHV3-HFYN*03 | IgLabel | OGRDB |
| IGHV-SSII_S0244 | RhGLDB+ | RhGLDB+ |
External records i
OGRDB: IGHV3-HFYN*03
Contributed by Guo, MUSA, OGRDB, RhGLDB+. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACAGTGAGGAGAAGTCAGTGTGAGCCCAGACACAAAAC | MUSA | RHESUS-R3MS3L |
Leader
Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.
| Leader (exon 1 + exon 2) | Split | Source | Leader UID |
|---|---|---|---|
| ATGGAGTTTGTGCTGAGTTTGGTTTTCCTTGTTGCTATTTTAAAAGGTGTGTCCAGTGT | 48 + 11 nt | MUSA | RHESUS-LGOQGS |
Find similar alleles
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VHQYDCR44/similar?min_identity=0.95&kind=nt.
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
API: JSON · AIRR AlleleDescription · aliases