RHESUS-VKZRHLMAD

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGK TypeV FunctionalTrue Length285 nt

IGKV6-47*02: a Macaca mulatta IGK V allele sequence, 285 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Species	Macaca mulatta (NCBITAXON:9544)
Locus / type	IGK / V
Functional i	True
Length	285 nt
Protein UID i	RHESUS-VP-GLOZBU (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

285 nt

GATATTGTGATGACTCAGTCTCCAGCCTTCGTCTCTGTGACTCCAGGGGAGAAAGTCACCATCACCTGCCAGGCCAGTGAGGGCATTAGCAACTACTTACACTGGTACCAGCAGAAACCAGATCAAGCCCCAAAGCTCTTCATCCAGTATGCTTCCCAGTCCATCTCAGGGGTCCCCTCGAGGTTCACTGGCAGCGGATCTGGGACAGATTTCACTTTTACCATCAGTAGCCTGGAAGTTGAAGATGCTGCAACATATTACTGTCAGCAGGGCAATAAGCACCCT

Amino-acid sequence (V-REGION)

95 aa

DIVMTQSPAFVSVTPGEKVTITCQASEGISNYLHWYQQKPDQAPKLFIQYASQSISGVPSRFTGSGSGTDFTFTISSLEVEDAATYYCQQGNKHP

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-VKZRHLMAD). None is canonical; they are labels, and the UID is the key.

Name	Scheme	Source(s)
IGKV6-6TCR*04	IgLabel	MUSA, OGRDB
IGKV6-47*02	IMGT	IMGT

Other names & identifiers

Alternative and former names, e.g. IMGT clone names, plus accession identifiers.

Name	Kind	Source(s)
NW_001099007.1	NCBI accession	ncbi_nucleotide

External records i

NCBI nucleotide: link NCBI Gene: NCBIGENE:701244 GenBank: GENBANK:NW_001099007 IMGT: IGKV6-47*02 OGRDB: IGKV6-6TCR*04

Literature references 2 total · 2 sequence-in-paper i

PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence.

PMID	Title	Evidence	Source
32866207	Mapping the immunogenic landscape of near-native HIV-1 envelope trimers in non-human primates.	sequence in paper	literature_supp
39068149	Multi-compartmental diversification of neutralizing antibody lineages dissected in SARS-CoV-2 spike-immunized macaques.	sequence in paper	literature_supp

Contributed by IMGT, MUSA, OGRDB, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACACTGCTACAACCCAAAACAAAAACT	IMGT MUSA	RHESUS-RTRYUY

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGGTGTCCCCATTGCAACTCCTGGGGCTTCTGCTCCTCTGGGTTCCAGCCTCCAGAGGT	49 + 11 nt	IMGT	RHESUS-LK6RNX
ATGGTGTCCCCATTGCAACTCCTGGGGCTTCTGCTCCTCTGGGTTCCGGGTCCTCCAGAGGT	51 + 11 nt	MUSA	RHESUS-LKOUQP
ATGGTGTCCCCATTGCAACTCCTGGGGCTTCTGCTCCTCTGGGTTCCAGGTCCTCCAGAGGT	51 + 11 nt	MUSA	RHESUS-LRS4EJ
ATGGTGTCTCCATTGCAACTCCTGGGGCTTCTGCTCCTCTGGGTTCCAGGTCCTCCAGAGGT	51 + 11 nt	MUSA	RHESUS-LSG3SV

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VKZRHLMAD/similar?min_identity=0.95&kind=nt.

API: JSON · AIRR AlleleDescription · aliases