RHESUS-VLGFE4I3D

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGH TypeV FunctionalFalse Length296 nt

Species	Macaca mulatta (NCBITAXON:9544)
Locus / type	IGH / V
Functional i	False
Length	296 nt
Protein UID i	RHESUS-VP-UQLDFB (shared by alleles with the same V-REGION amino-acid sequence)

Allele names i

Every name below denotes this exact sequence (RHESUS-VLGFE4I3D). None is canonical; they are labels, and the UID is the key.

Multiple allele designations. This one sequence is recorded under 2 different allele designations: IGHV3-134*02, IGHV3-NL_15*01_S0604. These are identical normalized nucleotide sequences with different attributed names.

Name	Scheme	Source(s)
IGHV3-35O3*01	IgLabel	MUSA
IGHV3-MEBQ*02	IgLabel	OGRDB
IGHV3-134*02	IMGT	IMGT
IGHV3-NL_15*01_S0604	KIMDB	KIMDB

External records i

GenBank: GENBANK:IMGT000099 IMGT: IGHV3-134*02 OGRDB: IGHV3-MEBQ*02

Literature references 1 total · 1 sequence-in-paper i

PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence.

PMID	Title	Evidence	Source
35419009	Addressing IGHV Gene Structural Diversity Enhances Immunoglobulin Repertoire Analysis: Lessons From Rhesus Macaque.	sequence in paper	literature_supp

Contributed by IMGT, KIMDB, MUSA, OGRDB. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGTGAGGGGAAGTCAGTGAGAGCCCAGACAAAAACG	IMGT MUSA	RHESUS-RYE2NW

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
CTGGAGTTTGGGCTGAGCTGGGTTTTCCTTGTTGCTATTTTAAAAGGTGTCCAGTGT	46 + 11 nt	IMGT	RHESUS-L3JISC
ATGGCCCCTGTGGGATTGGGGGTTTACATTTACATCTGTAAATGAAGTGTCCAGTGT	46 + 11 nt	MUSA	RHESUS-LXXQBU

Find similar alleles

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VLGFE4I3D/similar?min_identity=0.95&kind=nt.

Coding sequence (nt)

296 nt

GACGTGCAGCTGGTGGAGTCTGGGGGAGGCGTGGTCCAGCCTGGCGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTGATGATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGTCTGGAGTGGGTATCTCGGATTAGTTGGGATGGTGGTAGCACATATTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACACTGTATCTGCAAATGGACAGGCTGAGAGCTGAGGACACGGCCTTGTATTACTGTAGTAGAGA

Amino-acid sequence (V-REGION)

98 aa

DVQLVESGGGVVQPGGSLRLSCAASGFTFDDYAMSWVRQAPGKGLEWVSRISWDGGSTYYADSVKGRFTISRDNAKNTLYLQMDRLRAEDTALYYCSR

Published by the source, and consistent with the nucleotide sequence above. i

API: JSON · AIRR AlleleDescription · aliases