RHESUS-VOL7K3BQZ
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGHV4-4MLZ*01_i0aaca_c1a_a2c_g3t_c7t_a8t_g9t_g12-_g15t_18----ca23_c25t_c26t_a27c_g31t_a33g_g36t_t38a_a41c_g42a_c43a_t45g_g48a_g57c_c66g_g70a_t81a_g83t_t85c_t87c_g104t_c105a_g107c_t108c_i110tgctt_a113t_g116a_c120t_g123t_c127t_130----133_c137t_g140a_g141a_a142g_g144t_t149a_t159c_g160c_164gcgaggg170_g172t_a175g_g176a_t177a_c195a_g196a_a198t_207actt210_a216g_223-------229_t234a_237------242_g246a_c255a_c263-_c264-_c265-_g267a_a268c_c276-_t277-_a283t_c287g_c288t_c290a_g291a_g292c_g297a_g298a_c300t_g301a_t304c_a308t_c309t_311taaga315_g317a: a Macaca mulatta IGH V allele sequence, 275 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGH / V |
| Functional i | False |
| Length | 275 nt |
| Protein UID i | RHESUS-VP-2KA4LU (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VOL7K3BQZ). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGHV4-4MLZ*01_i0aaca_c1a_a2c_g3t_c7t_a8t_g9t_g12-_g15t_18----ca23_c25t_c26t_a27c_g31t_a33g_g36t_t38a_a41c_g42a_c43a_t45g_g48a_g57c_c66g_g70a_t81a_g83t_t85c_t87c_g104t_c105a_g107c_t108c_i110tgctt_a113t_g116a_c120t_g123t_c127t_130----133_c137t_g140a_g141a_a142g_g144t_t149a_t159c_g160c_164gcgaggg170_g172t_a175g_g176a_t177a_c195a_g196a_a198t_207actt210_a216g_223-------229_t234a_237------242_g246a_c255a_c263-_c264-_c265-_g267a_a268c_c276-_t277-_a283t_c287g_c288t_c290a_g291a_g292c_g297a_g298a_c300t_g301a_t304c_a308t_c309t_311taaga315_g317a | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACAATGAGGGGACTTTACTGTGAGCCTGGACACAAACC | MUSA | RHESUS-RWZAYB |
Leader
Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.
| Leader (exon 1 + exon 2) | Split | Source | Leader UID |
|---|---|---|---|
| ATGGTATTGCCTTCTCATGAGATATTGTTCGATCTAAACTGAAACCCAGAACCCGTTAACATC | 46 + 17 nt | MUSA | RHESUS-LCYEZM |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VOL7K3BQZ/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases