RHESUS-VOYKTVBN6

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGH TypeV FunctionalTrue Length302 nt

Species	Macaca mulatta (NCBITAXON:9544)
Locus / type	IGH / V
Functional i	True
Length	302 nt
Protein UID i	RHESUS-VP-QPSH4P (shared by alleles with the same V-REGION amino-acid sequence)

Allele names i

Every name below denotes this exact sequence (RHESUS-VOYKTVBN6). None is canonical; they are labels, and the UID is the key.

Multiple allele designations. This one sequence is recorded under 2 different allele designations: IGHV3-118*04, IGHV9-3L3I*04_g192t. These are identical normalized nucleotide sequences with different attributed names.

Name	Scheme	Source(s)
IGHV9-WAVT*09	IgLabel	OGRDB
IGHV3-118*04	IMGT	IMGT
IGHV9-3L3I*04_g192t	VDJbase	MUSA

Other names & identifiers

Alternative and former names, e.g. IMGT clone names, plus accession identifiers.

Name	Kind	Source(s)
SBKD01011378.1	NCBI accession	ncbi_nucleotide

External records i

NCBI nucleotide: link GenBank: GENBANK:SBKD01011378 IMGT: IGHV3-118*04 OGRDB: IGHV9-WAVT*09

Contributed by IMGT, MUSA, OGRDB, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGTGAGGGGAGGTCAGTGTGAGCCCAGACACAAACC	IMGT MUSA	RHESUS-R6AAZB

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGGAGTTTGTACTGAGCTGGGTTTTCCTTGTTGCTATATTAAAAGGTGTCCAGTGT	46 + 11 nt	IMGT	RHESUS-LJZWL4
ATGGAGTTTGTACTGAGCTGGGTTTTCCTTGTTGCTATATTAAAAGGTGTGTCCAGTGT	48 + 11 nt	MUSA	RHESUS-LPVQC5

Find similar alleles

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VOYKTVBN6/similar?min_identity=0.95&kind=nt.

Coding sequence (nt)

302 nt

GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGCGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATGCCATGAGCTGGGTCCGCCAGGCTTCTGGGAAAGGACTGGAGTGGGTTGGCTATATTAGAAGCAAATATAACAATTACGCTACAGAATACGCCGCATCGGTGAAAGGCAGATTCACCATCTCCAGAGATGATTCAAAGAACACGCTATATCTGCAAATGAGCAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGCACCACAGA

Amino-acid sequence (V-REGION)

100 aa

EVQLVESGGGLVQPGGSLRLSCAASGFTFSDYAMSWVRQASGKGLEWVGYIRSKYNNYATEYAASVKGRFTISRDDSKNTLYLQMSSLKTEDTAVYYCTT

Published by the source, and consistent with the nucleotide sequence above. i

API: JSON · AIRR AlleleDescription · aliases