RHESUS-VP3KOTERZ
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGKV2-39*01, IGKV2-ZBTP*01_c2a_g4a_t5c_g37a_c43a_a47g_g51a_t55g_a56g_g68t_a72g_t125a_g135t_g167t_g202a_a204c_g220a_t231g_g233a_g250a_t254c_a257c_c265t_t294c_c303t_i306tgc_t331c: a Macaca mulatta IGK V allele sequence, 305 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGK / V |
| Functional i | False |
| Length | 305 nt |
| Protein UID i | RHESUS-VP-WXYJDN (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Published by the source, and consistent with the nucleotide sequence above. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VP3KOTERZ). None is canonical; they are labels, and the UID is the key.
Multiple allele designations. This one sequence is recorded under 2 different allele designations: IGKV2-39*01, IGKV2-ZBTP*01_c2a_g4a_t5c_g37a_c43a_a47g_g51a_t55g_a56g_g68t_a72g_t125a_g135t_g167t_g202a_a204c_g220a_t231g_g233a_g250a_t254c_a257c_c265t_t294c_c303t_i306tgc_t331c. These are identical normalized nucleotide sequences with different attributed names.
| Name | Scheme | Source(s) |
|---|---|---|
| IGKV0-TLTS*02 | IgLabel | OGRDB |
| IGKV2-39*01 | IMGT | IMGT |
| IGKV2-ZBTP*01_c2a_g4a_t5c_g37a_c43a_a47g_g51a_t55g_a56g_g68t_a72g_t125a_g135t_g167t_g202a_a204c_g220a_t231g_g233a_g250a_t254c_a257c_c265t_t294c_c303t_i306tgc_t331c | VDJbase | MUSA |
Other names & identifiers
Alternative and former names, e.g. IMGT clone names, plus accession identifiers.
| Name | Kind | Source(s) |
|---|---|---|
| BK063716.1 | NCBI accession | ncbi_nucleotide |
External records i
NCBI nucleotide: link GenBank: GENBANK:BK063716 GenBank: GENBANK:BK063716.1 IMGT: IGKV2-39*01 OGRDB: IGKV0-TLTS*02
Literature references i
PubMed publications linked to this allele.
Contributed by IMGT, MUSA, OGRDB, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACAGTGGTACAGTCCTGAACCCTAACC | MUSA | RHESUS-R3ICQ4 |
| v_rs | CACAATGGTACAGTCCTGAACCCTAACC | IMGT MUSA | RHESUS-R4LW2A |
Leader
Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.
| Leader (exon 1 + exon 2) | Split | Source | Leader UID |
|---|---|---|---|
| ATAAGGTTCCCTGCTCAGCTCCCAAGGCTAATACTCTGGGTCCATAGATCTAATGGA | 46 + 11 nt | IMGT | RHESUS-LKT4KV |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VP3KOTERZ/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases