RHESUS-VRAKJDID6
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGH / V |
| Functional i | False |
| Length | 302 nt |
| Protein UID i | RHESUS-VP-5X6CDA (shared by alleles with the same V-REGION amino-acid sequence) |
Allele names i
Every name below denotes this exact sequence (RHESUS-VRAKJDID6). None is canonical; they are labels, and the UID is the key.
Multiple allele designations. This one sequence is recorded under 2 different allele designations: IGHV3-NL_18*01_W8475, IGHV9-7U4O*01_c43a_c48g_c62t_t121c_a162c_c163t_g164a_a185g_g190c_a275g. These are identical normalized nucleotide sequences with different attributed names.
| Name | Scheme | Source(s) |
|---|---|---|
| IGHV3-NL_18*01_W8475 | Guo | Guo |
| IGHV9-K2T3*01 | IgLabel | OGRDB |
| IGHV9-7U4O*01_c43a_c48g_c62t_t121c_a162c_c163t_g164a_a185g_g190c_a275g | VDJbase | MUSA |
External records i
OGRDB: IGHV9-K2T3*01
Contributed by Guo, MUSA, OGRDB. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACAGTGAGGGGAGGTCAGTGTGAGCCCAGACGCAAACC | MUSA | RHESUS-RE2DSM |
Leader
Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.
| Leader (exon 1 + exon 2) | Split | Source | Leader UID |
|---|---|---|---|
| ATGGAGTTTGTACTGAGCTGGGTTTTCCTTGTTGCCATTTTAAAAGGTGTGTCCAGTGT | 48 + 11 nt | MUSA | RHESUS-LF2P7V |
Find similar alleles
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VRAKJDID6/similar?min_identity=0.95&kind=nt.
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
API: JSON · AIRR AlleleDescription · aliases