RHESUS-VTBKKYC2M
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGLV3-20*01, IGLV3-AAJ*01: a Macaca mulatta IGL V allele sequence, 286 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGL / V |
| Functional i | False |
| Length | 286 nt |
| Protein UID i | RHESUS-VP-NR2BLW (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VTBKKYC2M). None is canonical; they are labels, and the UID is the key.
Multiple allele designations. This one sequence is recorded under 2 different allele designations: IGLV3-20*01, IGLV3-AAJ*01. These are identical normalized nucleotide sequences with different attributed names.
| Name | Scheme | Source(s) |
|---|---|---|
| IGLV0-JFFW*01 | IgLabel | OGRDB |
| IGLV26-JFFW*01 | IgLabel | MUSA |
| IGLV3-20*01 | IMGT | IMGT |
| IGLV3-AAJ*01 | RhGLDB+ | RhGLDB+ |
External records i
genbank:MF989453: GENBANK:MF989453 IMGT: IGLV3-20*01 OGRDB: IGLV0-JFFW*01
Literature references i
PubMed publications linked to this allele. A sequence-in-paper match indicates that this allele's exact sequence was detected in the publication text or supplementary material; it is sequence-level evidence.
Contributed by IMGT, MUSA, OGRDB, RhGLDB+. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACAGTGACACAGGGAGAGGGAGGAGCAAGACACAGGCT | IMGT MUSA | RHESUS-RL2TAX |
Leader
Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.
| Leader (exon 1 + exon 2) | Split | Source | Leader UID |
|---|---|---|---|
| ATGGCCTGGTCCCTCTTTTCCTGGGTCTCCTGACTCACTGCACAGGCTCTGTCATC | 45 + 11 nt | IMGT | RHESUS-L6EIHL |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VTBKKYC2M/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases