AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-VTEEZB3QY

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGL TypeV FunctionalFalse Length317 nt

IGLV21-NBMT*01_c1a_2gtct5_c16g_c19t_t41c_g42a_a44g_t50c_c78t_g83a_g89a_t93c_g103a_g104a_g107t_t113g_g115a_a119c_c120t_a134g_g143a_c144t_a145c_c148t_c149t_g152a_g177c_a190g_g191t_c206a_a210g_a319c_g338c: a Macaca mulatta IGL V allele sequence, 317 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGL / V
Functional iFalse
Length317 nt
Protein UID iRHESUS-VP-5UMJZW (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

317 nt
AGTCTTGTGCTGACTGAGTCACCCTCCCTCTCTGCATCCCCAGGAGCATCAGCCAGACTCACCTGCACCCTGAGTAGTGACATCAATGTCAATGTAAAAAGTATATCTTGGTACCAGCAGAGGCCAGGGAATCATTTCCAGTATCTCCTGAGCTACTACTCAGACTCAGTTAAGCACCAGGGCTATGGGGTCCCCGGCCGCTTCTCTGGATCCAAAGATGCCTCAACTAACTCAGGGATTCTGCACATCTCTGGGCTGCAGCCTGAGGACGAGGCTGATCATCATTGTAAGATACGGCATGACAGCATTAATGCTTA

Amino-acid sequence (V-REGION)

105 aa
SLVLTESPSLSASPGASARLTCTLSSDINVNVKSISWYQQRPGNHFQYLLSYYSDSVKHQGYGVPGRFSGSKDASTNSGILHISGLQPEDEADHHCKIRHDSINA

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-VTEEZB3QY). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGLV24-HIDS*03 IgLabel OGRDB
IGLV21-NBMT*01_c1a_2gtct5_c16g_c19t_t41c_g42a_a44g_t50c_c78t_g83a_g89a_t93c_g103a_g104a_g107t_t113g_g115a_a119c_c120t_a134g_g143a_c144t_a145c_c148t_c149t_g152a_g177c_a190g_g191t_c206a_a210g_a319c_g338c VDJbase MUSA

External records i

OGRDB: IGLV24-HIDS*03

Contributed by MUSA, OGRDB. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGCTCCAGACTCAGAGAGAAGTGAGCAAAAAGC MUSA RHESUS-R4534Y

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VTEEZB3QY/similar?min_identity=0.95&kind=nt.