AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

RHESUS-VU7FNL2OB

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusTRB TypeV FunctionalNone Length282 nt

TRBV8-2*02: a Macaca mulatta TRB V allele sequence, 282 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeTRB / V
Functional iNone
Length282 nt
Protein UID iRHESUS-VP-DKKML6 (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

282 nt
GATGCTGGGATCACCCAGACACCAAGATACTACATTATACAGACAGGAAAGAGATGATCCTGGAATGTGCTCAGGTTAGGAACCATTATTCAATGTTCTGATATCGACAAGACCCAGGACAGAGGCTGAAATTGATCCGTTATTCAGGTAGTGGTGGCAGCAGGACCAAAGTTGATGTCACAGAAGGGTACAGTGTCTCTGGAAACAAGCCTGAGCATTTCCCCTGAGCCTGGCATCCACCAGCACCAGCCGGACTTCTCTGTACCTCTGCGGCAGTGCATC

Amino-acid sequence (V-REGION)

94 aa
DAGITQTPRYYIIQTGKR*SWNVLRLGTIIQCSDIDKTQDRG*N*SVIQVVVAAGPKLMSQKGTVSLETSLSISPEPGIHQHQPDFSVPLRQCI

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-VU7FNL2OB). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
TRBV8-2*02 IMGT IMGT

External records i

IMGT: TRBV8-2*02

Literature references 1 total · 1 name-mentioned* i

PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMIDTitleEvidenceSource
35436998 pmTR database: population matched (pm) germline allelic variants of T-cell receptor (TR) loci. name mentioned* literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGCCCTGTACAGCCAGCTGCTCTCTGCACCAAAAGG IMGT RHESUS-RRJYQK

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGAACCCCAAACTCTTCTGCATGACCCTTTGTCTCCTGGGAGCATACTCTGTT 46 + 8 nt IMGT RHESUS-LP2K5M

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VU7FNL2OB/similar?min_identity=0.95&kind=nt.