RHESUS-VUPK7IZRB

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGK TypeV FunctionalTrue Length287 nt

Species	Macaca mulatta (NCBITAXON:9544)
Locus / type	IGK / V
Functional i	True
Length	287 nt
Protein UID i	RHESUS-VP-5ZVVBN (shared by alleles with the same V-REGION amino-acid sequence)

Allele names i

Every name below denotes this exact sequence (RHESUS-VUPK7IZRB). None is canonical; they are labels, and the UID is the key.

Name	Scheme	Source(s)
IGKV3-2VHT*09	IgLabel	MUSA
IGKV3-AOP2*09	IgLabel	OGRDB
IGKV3-31*01	IMGT	IMGT

Other names & identifiers

Alternative and former names, e.g. IMGT clone names, plus accession identifiers.

Name	Kind	Source(s)
BK063716.1	NCBI accession	ncbi_nucleotide

External records i

NCBI nucleotide: link GenBank: GENBANK:BK063716 GenBank: GENBANK:BK063716.1 IMGT: IGKV3-31*01 OGRDB: IGKV3-AOP2*09

Literature references 4 total · 2 verified · 2 name-mentioned* i

PubMed publications linked to this allele. Name-mentioned entries were auto-collected by name match and may refer to a different same-named allele; treat them as leads, not ground truth.

PMID	Title	Evidence	Source
34875068		verified	ncbi_nucleotide
35335026		verified	ncbi_nucleotide
36328595	Myeloma immunoglobulin rearrangement and translocation detection through targeted capture sequencing.	name mentioned^*	literature_supp
38707998	Maintenance of caecal homeostasis by diverse adaptive immune cells in the rhesus macaque.	name mentioned^*	literature_supp

* matched by allele name only. The publication mentions this name, but AIRBabel cannot determine from the name alone whether it refers to this allele; the same name can denote a different allele in another species. This is useful for literature review but is not verified evidence.

Contributed by IMGT, MUSA, OGRDB, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGTGATTCAACATGAAACAAAAACC	IMGT MUSA	RHESUS-RBC5TX

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGGAAGCCCCAGCACAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGGTATACCACCGGA	51 + 11 nt	MUSA	RHESUS-LFQEHW
ATGGAAGCCCCAGCACAGCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGA	49 + 11 nt	IMGT	RHESUS-LRB37R

Find similar alleles

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VUPK7IZRB/similar?min_identity=0.95&kind=nt.

Coding sequence (nt)

287 nt

GAAATTGTGATGACACAATCTCCAGCCACCTTGTCTTTGTCTCCAGGGGAAACAGCCACCATCTCCTGCAGGACCAGTCAGAGTGTTAGCAGCTACTTAGCCTGGTACCAGCAGAAACCTGGGCAGGCTCCCAGGCTCCTCATCTATGGTGCATCCAGCAGGGCCACTGGCATCCCAGACAGGTTCAGTGGCAGCGGGTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTGGAGCCTGAATATTTTGCAGTTTATTACTGTCAGGAGACTAGTAACTTATCTCC

Amino-acid sequence (V-REGION)

95 aa

EIVMTQSPATLSLSPGETATISCRTSQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISSLEPEYFAVYYCQETSNLS

Published by the source, and consistent with the nucleotide sequence above. i

API: JSON · AIRR AlleleDescription · aliases